Job Description P0A8M0 Confidence 99.94% Date Thu Jan 5 11:08:10 GMT 2012 Rank 29 Aligned Residues 215 % Identity 19% Template c2rhqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase alpha chain; PDBTitle: phers from staphylococcus haemolyticus- rational protein2 engineering and inhibitor studies Resolution 2.20 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		R	H	T	L	A	Q	A	L	H	R	F	F	N	E	Q	G	F	F	W	V	S	T	P	L	I	T	A	S	D	T	E	G	A	G	E	M	F	R	V	S	T	L	D	L	E	N	L	P	R	N	D	Q	G	K	V	D	F	D	K	D	F	F	G	K	E	S	F	L	T	.	.	V	S	G	Q	L	N	G	E	T
Query Conservation																																																																							.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	R	T	V	E	E	I	E	D	L	F	L	G	L	G	Y	E	I	V	D	G	Y	E	V	E	Q	D	Y	Y	N	F	E	A	L	N	L	P	K	S	H	P	A	R	D	M	Q	D	S	.	.	.	.	.	.	.	.	.	.	F	Y	I	T	D	E	I	L	M	R	T	H	T	S	P	V	Q	A	R	T	M
Template Known Secondary structure															T	T	T								S								T	G	G	G	T			T	T		G	G	G		T	T	T	S	.	.	.	.	.	.	.	.	.	.		B	S	S	S	S					S	S	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
					219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.																																							.	.
Query SS confidence		.	.	.																																							.	.
Query Sequence		.	.	.	Y	A	C	A	L	S	K	I	Y	T	F	G	P	T	F	R	A	E	N	S	N	T	S	R	H	L	A	E	F	W	M	L	E	P	E	V	A	F	.	.	A	N	L	N	D	I	A	G	L	A	E	A	M	L	K	Y	V	F	K	A	V	L	E	E	R	A	D	D	M	K	F	F	A	E	R	V	D
Query Conservation		.	.	.																																							.	.
Alig confidence		.	.	.																								.															.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	R	N	G	Q	G	P	V	K	I	I	C	P	G	K	V	Y	R	R	D	S	D	D	A	T	.	H	S	H	Q	F	T	Q	I	E	G	L	V	V	D	K	N	I	K	M	S	D	L	K	G	T	L	E	L	V	A	K	K	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	T		S																	B	T	T	.	B		S												S	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.				.	.	.	.	370
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		K	D	A	V	S	R	L	E	R	F	I	E	A	D	F	A	Q	V	D	Y	T	D	A	V	T	I	L	E	N	C	G	R	K	F	E	N	P	V	Y	W	G	V	D	L	S	S	E	H	E	R	Y	L	A	E	E	H	F	K	A	P	V	V	V	K	N	Y	P	K	D	I	K	A	.	.	.	F	Y	M	R	L
Query Conservation																																																																										.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	R	E	I	R	L	R	P	S	Y	F	P	F	T	E	P	S	V	E	V	D	V	S	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										B	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																								242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	D	G	K	T	V	A	A	M	D	V	L	A	P	G	I	G	E	I	I	G	G	S	Q	R	E	E	R	L	D	V	L	D	E	R	M	L	E	M	G	L	N	K	E	D	Y	W	W	Y	R	D	L	R	R	Y	G	T	V	P	H	S	G	F	G	L	G	F	E	R	L	I	A	Y	V	T	G	V	Q	N
Query Conservation
Alig confidence																			.			.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.			.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	C	K	G	K	G	C	N	V	C	K	H	T	G	W	I	.	E	I	.	L	G	A	G	M	V	H	.	.	.	.	.	P	N	V	L	E	M	A	G	F	D	S	N	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	S	G	F	A	F	G	M	G	P	D	R	I	A	M	L	K	Y	G	I	E	D
Template Known Secondary structure		S	S	S	T	T	S			T	T	T	T	T	S	S			.			.								.	.	.	.	.						T	T	T			T	T	T		.	.	.	.	.	.	.	.	.	.	.	.																		T
Template Predicted Secondary structure																			.			.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.		.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.													.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		451	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	D	V	I	P	F	P	R	T
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		I	R	Y	.	.	F	Y	T	N	D
Template Known Secondary structure		T	T		.	.
Template Predicted Secondary structure					.	.
Template SS confidence
		329	330	.			.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions