Job Description P0A8M0 Confidence 95.51% Date Thu Jan 5 11:08:10 GMT 2012 Rank 106 Aligned Residues 98 % Identity 14% Template c2k75A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:uncharacterized protein ta0387; PDBTitle: solution nmr structure of the ob domain of ta0387 from2 thermoplasma acidophilum. northeast structural genomics3 consortium target tar80b. Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.										.	.
Query SS confidence																														.	.	.	.	.										.	.
Query Sequence		S	V	V	P	V	A	D	V	L	Q	G	R	V	A	V	D	S	E	V	T	V	R	G	W	V	R	T	R	.	.	.	.	.	R	D	S	K	A	G	I	S	F	.	.	L	A	V	Y	D	G	S	C	F	D	P	V	Q	A	V	I	N	N	S	L	P	N	Y	N	E	D	V	L	R	L	T	T	G	C	S	V
Query Conservation																														.	.	.	.	.										.	.
Alig confidence														.	.	.	.													.	.	.	.	.										.	.									.	.											.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.																																					.	.											.	.	.	.	.	.	.	.	.
Template Sequence		D	L	V	K	I	R	D	V	S	L	S	T	.	.	.	.	P	Y	V	S	V	I	G	K	I	T	G	I	H	K	K	E	Y	E	S	D	G	T	T	K	S	V	Y	Q	G	Y	I	E	D	D	T	A	.	.	R	I	R	I	S	S	F	G	K	Q	.	.	.	.	.	.	.	.	.	L	Q	D	S	D	V	V
Template Known Secondary structure			B			S	T	T			T	T		.	.	.	.	S																			T	T													S	S		.	.								S	S		.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure														.	.	.	.																																					.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	G	K	V	V	A	S	P	G	Q	G	Q	Q	F	E	I	Q	A	S	K	V	E	V	A	G	W	V	E	D	P	D	T	Y	P	M	A	A	K	R	H
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		R	I	D	N	A	R	V	A	Q	.	.	F	N	G	Y	L	S	L	S	V	G	D	S	S	R	I	E	S	V	N	V	N	I	P	L	E	H	H	H	H	H	H
Template Known Secondary structure											.	.		T	T								T	T	S							S					S			S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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