Job Description P0A8M0 Confidence 98.43% Date Thu Jan 5 11:08:10 GMT 2012 Rank 78 Aligned Residues 125 % Identity 14% Template c2dq0A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	R	V	R	H	T	L	A	Q	A	L	H	R	F	F	N	E	Q	G	F	F	W	V	S	T	P	L	I	T	A	S	D	T	E	G	A	G	E	M	F	R	V	S	T	L	D	L	E	N	L	P	R	N	D	Q	G	K	V	D	F	D	K	D	F	F	G	K	E	S	F	L	T	V	S	G	Q	L	N
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	V	I	L	D	L	A	L	I	R	F	A	L	D	R	L	I	E	K	G	F	T	P	V	I	P	P	Y	M	V	R	R	F	V	E	E	G	S	T	S	F	E	D	F	E	D	V	I	Y	K	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	D	L	Y	L	I	P	T	A	E	H	P
Template Known Secondary structure																					T	T								S									T	T	S		T	T					T			B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S					S	S	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.															.	.	.	.	.	.	250	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.									.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query Sequence		G	E	T	Y	A	C	A	L	S	.	.	.	.	.	.	.	.	K	I	Y	T	F	G	P	T	F	R	A	E	.	.	.	.	.	.	N	S	N	T	S	R	H	L	A	E	F	W	M	L	E	P	E	V	A	F	A	N	L	N	D	I	A	G	L	A	E	A	M	L	K	Y	V	F	K
Query Conservation											.	.	.	.	.	.	.	.													.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.													.	.	.	.	.	.																			.
Template Conservation																																																							.
Template Sequence		L	A	G	M	H	A	N	E	I	L	D	G	K	D	L	P	L	L	Y	V	G	V	S	P	C	F	R	K	E	A	G	T	A	G	K	D	T	K	G	I	F	R	V	H	Q	F	H	K	V	E	Q	F	V	.	Y	S	R	P	E	E	S	W	E	W	H	E	K	I	I	R	N	A	E	E
Template Known Secondary structure					T	T	T	T					T	T	T		S														T	T		S	S		S			S	S	S	S		S										.				T	T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions