Job Description P0A8M0 Confidence 95.20% Date Thu Jan 5 11:08:10 GMT 2012 Rank 108 Aligned Residues 98 % Identity 13% Template c1ynxA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:replication factor-a protein 1; PDBTitle: solution structure of dna binding domain a (dbd-a) of2 s.cerevisiae replication protein a (rpa) Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.
Query Sequence		S	V	V	P	V	A	D	V	L	Q	G	R	V	A	V	D	S	E	V	T	V	R	G	W	V	R	T	R	.	.	.	.	.	.	.	.	R	D	S	K	A	G	I	S	F	L	A	V	Y	D	G	S	C	F	D	P	V	Q	A	V	I	N	N	S	L	P	N	Y	N	E	D	V	L	R	L	T	T	G	C	S
Query Conservation																														.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.													.	.	.	.	.	.	.	.																		.	.																.	.
Template Conservation														.	.	.	.																																						.	.																.	.
Template Sequence		P	I	F	A	I	E	Q	L	S	P	Y	Q	.	.	.	.	N	V	W	T	I	K	A	R	V	S	Y	K	G	E	I	K	T	W	H	N	Q	R	G	D	G	K	L	F	N	V	N	F	L	D	T	S	G	.	.	E	I	R	A	T	A	F	N	D	F	A	T	K	F	N	.	.	E	I	L	Q	E	G	K	V
Template Known Secondary structure			B			G	G	G			T	T	T	.	.	.	.																					S	S													T	T		.	.																.	.			S		S	S	S
Template Predicted Secondary structure														.	.	.	.																																						.	.																.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		V	I	V	T	G	K	V	V	A	S	P	G	Q	.	.	.	.	.	G	Q	Q	F	E	I	Q	A	S	K	V	E	V	A	G	W	V	E	D	P	D
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		Y	Y	V	S	K	A	K	L	Q	P	A	K	P	Q	F	T	N	L	T	H	P	Y	E	L	N	L	D	R	D	T	V	I	E	E	C	F	D	E	S
Template Known Secondary structure						S								T	T	T	S	S	S	S	S								S	S						S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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