Job Description P0A8M0 Confidence 98.51% Date Thu Jan 5 11:08:10 GMT 2012 Rank 75 Aligned Residues 122 % Identity 15% Template c1sryB_ PDB info PDB header:ligase(synthetase) Chain: B: PDB Molecule:seryl-trna synthetase; PDBTitle: refined crystal structure of the seryl-trna synthetase from2 thermus thermophilus at 2.5 angstroms resolution Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		A	V	A	R	V	R	H	T	L	A	Q	A	L	H	R	F	F	N	E	Q	G	F	F	W	V	S	T	P	L	I	T	A	S	.	.	.	.	.	.	.	.	D	T	E	G	A	G	E	M	F	R	V	S	T	L	D	L	E	N	L	P	R	N	D	Q	G	K	V	D	F	D	K	D	F	F	G	K	E	S	F
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	A	L	Y	E	L	A	L	L	R	F	A	M	D	F	M	A	R	R	G	F	L	P	M	T	L	P	S	Y	A	R	E	K	A	F	L	G	T	G	H	F	P	A	Y	R	D	Q	V	W	A	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	D	L	Y
Template Known Secondary structure																				T	T	T								S											T		T	T	T	T	G	G	G			B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																							.	.	.	220	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.									.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.													.	.	.	.	.	.																				.
Query SS confidence																			.	.	.	.	.	.	.	.													.	.	.	.	.	.																				.
Query Sequence		L	T	V	S	G	Q	L	N	G	E	T	Y	A	C	A	L	S	.	.	.	.	.	.	.	.	K	I	Y	T	F	G	P	T	F	R	A	E	.	.	.	.	.	.	N	S	N	T	S	R	H	L	A	E	F	W	M	L	E	P	E	V	A	.	F	A	N	L	N	D	I	A	G	L	A	E	A	M	L	K	Y
Query Conservation																			.	.	.	.	.	.	.	.													.	.	.	.	.	.																				.
Alig confidence																			.	.	.	.	.	.	.	.													.	.	.	.	.	.																				.
Template Conservation
Template Sequence		L	T	G	T	A	E	V	V	L	N	A	L	H	S	G	E	I	L	P	Y	E	A	L	P	L	R	Y	A	G	Y	A	P	A	F	R	S	E	A	G	S	F	G	K	D	V	R	G	L	M	R	V	H	Q	F	H	K	V	E	Q	Y	V	L	T	E	A	S	L	E	A	S	D	R	A	F	Q	E	L	L	E	N
Template Known Secondary structure				S	S	T							T	T	T	T					G	G	G		S															S	S		T	T	S	S		S	S	S	S		S													S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		273	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	K	A	V	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	E	I	L	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions