 |
Job Description | P17109 | Confidence | 58.05% | Date | Thu Jan 5 11:35:57 GMT 2012 |
Rank | 180 | Aligned Residues | 88 |
% Identity | 14% | Template | d2g0ta1 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Nitrogenase iron protein-like
|
Resolution | 2.67 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | S | A | F | N | R | R | W | A | A | V | I | L | E | A | L | T | R | H | G | V | R | H | I | C | I | A | P | G | S | R | S | T | P | L | T | L | A | A | A | E | N | S | A | F | I | H | H | T | H | F | D | E | R | G | L | G | H | L | A | L | G | L | A | K | V | S | K | Q | P | V | A | V | I | V | T | S | G | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
| . |   |   |
|
|   |
|
|
|
|
|
| . |
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
Template Sequence |   |
P | G | G | Y | L | E | E | Q | I | A | T | L | V | K | K | A | L | . |
S | L | G | X | D | V | I | S | G | L | H | . |
F | S | Q | Q | T | E | F | L | K | I | A | H | E | N | G | T | R | I | I | D | I | R | I | P | P | L | E | L | D | V | L | R | G | G | I | Y | R | K | K | I | K | V | V | G | V | F | G | T | D | C |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  | T | T |
|  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | S | S | S |
|
| S | S |
|
|
|
|
| S | G | G | G | G |
|
| S |  |  |  |  |  |  |  | S | S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|  |  |  |  |
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
. | . | . | . | . | 110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | A | N | L | Y | P | A | L | I |
Query Conservation |   |
|   |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|
|
|   |
Template Sequence |   |
V | V | G | K | R | T | T | A | V | Q |
Template Known Secondary structure |   |
S | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|