Job Description P17109 Confidence 99.22% Date Thu Jan 5 11:35:57 GMT 2012 Rank 69 Aligned Residues 170 % Identity 16% Template d2c42a2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) PFOR PP module Resolution 1.78

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.								.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																													.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		D	A	F	G	E	A	Q	L	A	H	R	I	C	D	Y	L	P	E	Q	G	Q	L	F	V	G	N	S	L	V	V	R	L	I	D	A	L	S	Q	L	P	A	G	Y	.	.	.	.	.	.	.	P	V	Y	S	N	R	G	A	S	G	I	D	G	L	L	S	T	A	A	G	V	Q	R	A	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.										.	.	.	.												.	.	.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		S	G	C	G	E	T	P	Y	V	R	V	I	T	Q	L	F	G	E	R	M	F	I	A	N	A	T	G	C	S	S	I	W	G	A	S	A	P	S	M	P	Y	K	T	N	R	L	G	Q	G	P	A	W	G	N	S	L	F	E	D	.	.	.	.	A	A	E	Y	G	F	G	M	N	M	S	M	F	A	R	R	T
Template Known Secondary structure		T	T		S	S												G	G	G							S	S									T	T				B				T	T	S										S	T	T	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.					.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.
																																																																		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	K	P	T	L	A	I	V	G	D	L	S	A	L	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		H	L	A	D	L	A	A	K	A	L	E	S	D	A	S	G	D	V	K	E	A	L	Q	G	W	L	A	G	K	N	D	P	I	K	S	K	E	Y	G	D	K	L	K	K	L	L	A	G	Q	K	D	G	L	L	G	Q	I	A	A	M	S	D	L	Y	T	K	K	S	V	W	I	F	G	G	D	G	W	A	Y	D
Template Known Secondary structure												T	T	T																T	T	S															T	T	T			S								T	T	G	G	G	T	S															T
Template Predicted Secondary structure
Template SS confidence
		889	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.							.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.		510	.	.				.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.																	.				.	.	.
Query SS confidence																																																	.	.	.	.	.	.																	.				.	.	.
Query Sequence		Y	D	L	N	A	L	A	L	L	R	Q	V	S	A	P	L	V	L	I	V	V	N	N	N	G	G	Q	I	F	S	L	L	P	T	P	Q	S	E	R	E	R	F	Y	L	M	P	Q	.	.	.	.	.	.	N	V	H	F	E	H	A	A	A	M	F	E	L	K	Y	H	.	R	P	Q	.	.	.	N	W	Q	E
Query Conservation																																																	.	.	.	.	.	.																	.				.	.	.
Alig confidence																																																	.	.	.	.	.	.																	.				.	.	.
Template Conservation
Template Sequence		I	G	Y	G	G	L	D	H	V	L	A	S	G	E	D	V	N	V	F	V	M	D	T	E	V	Y	S	N	T	G	G	Q	S	S	K	A	T	P	T	G	A	V	A	K	F	A	A	A	G	K	R	T	G	K	K	D	L	A	R	M	V	M	T	Y	G	Y	V	Y	V	A	T	V	S	M	G	Y	S	K	Q	Q
Template Known Secondary structure		T	T										T	T		S									S	S	B	T	T	T	T		B			T	T	S		T	T			B	B	T	B	T	T			S	S											T	T	S	S	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		969	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	T	A	F	A	D	A	W	R	T	P	T	T	T	V	I	E	M	V	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	K	V	L	K	E	A	E	S	F	P	G	P	S	L	V	I	A	Y	A	T
Template Known Secondary structure												S	S	S
Template Predicted Secondary structure
Template SS confidence
		1049	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions