 |
Job Description | P17109 | Confidence | 49.08% | Date | Thu Jan 5 11:35:57 GMT 2012 |
Rank | 200 | Aligned Residues | 79 |
% Identity | 14% | Template | d1w5fa1 |
SCOP info | Tubulin nucleotide-binding domain-like
| Tubulin nucleotide-binding domain-like
| Tubulin, GTPase domain
|
Resolution | 2.0 |
|
 |
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
|
|
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | S | E | K | Q | R | D | W | F | F | W | R | Q | K | R | G | V | V | V | A | G | R | M | . |
. |
. |
S | A | E | E | G | K | K | V | A | L | W | A | Q | T | L | G | W | P | L | I | G | D | V | L | S | Q | T | G | Q | P | L | P | C | A | D | L | W | L | G | N | A | K | A | T | S | E | L | Q | Q | A | Q | I | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |   | . | . | . |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
|
|   |   | . |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
Template Sequence |   |
L | E | S | E | E | K | I | R | E | V | L | Q | D | T | H | M | V | F | I | T | A | G | F | G | G | G | T | G | T | G | A | S | P | V | I | A | K | I | A | K | E | M | G | I | L | T | V | A | I | V | T | T | P | F | Y | F | . |
E | G | P | E | R | L | K | K | A | I | E | G | L | K | K | L | R | K | H | V | D | T | L |
Template Known Secondary structure |   |
 |  | T |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
|
| G | G | . | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
  |   |
283 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
V | Q | L |
Query Conservation |   |
|   |
|
Alig confidence |   |
|
|
|
Template Conservation |   |
|
|   |
Template Sequence |   |
I | K | I |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
172 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|