Job Description P17109 Confidence 94.56% Date Thu Jan 5 11:35:57 GMT 2012 Rank 104 Aligned Residues 155 % Identity 11% Template d1umdb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.90

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.																										.
Query SS confidence																										.	.	.	.																										.
Query Sequence		A	F	N	R	R	W	A	A	V	I	L	E	A	L	T	R	H	G	V	R	H	I	C	I	.	.	.	.	A	P	G	S	R	S	T	P	L	T	L	A	A	A	E	N	S	A	F	I	H	H	T	H	F	.	D	E	R	G	L	G	H	L	A	L	G	L	A	K	V	S	K	Q	P	V	A	V	I	V	T	S
Query Conservation																										.	.	.	.																										.
Alig confidence																										.	.	.	.																										.																.
Template Conservation																																																																							.
Template Sequence		T	M	V	Q	A	L	N	R	A	L	D	E	E	M	A	K	D	P	R	V	V	V	L	G	E	D	V	G	K	R	G	G	V	F	L	V	T	E	G	L	L	Q	K	Y	G	P	D	R	V	M	D	T	P	L	S	E	A	A	I	V	G	A	A	L	G	M	A	A	H	.	G	L	R	P	V	A	E	I	Q	F
Template Known Secondary structure																			T	T						T	T		S	T	T			T	T	S	T	T	T	T							T	T	T						S																.	T								S	S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.										.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	A	V	A	N	L	Y	P	A	L	I	E	A	G	.	.	.	.	.	.	.	.	.	L	T	G	E	K	L	I	L	L	T	A	D	R	P	P	E	L	I	D	C	G	A	N	Q	A	I	R	Q	P	G	M	F	A	S	H	P	T	H	S	I	S	L	P	R	P	T	Q	D	I	P	A	R	W	L	V	S
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																	.	.																									.	.
Template Conservation																																										.	.																									.	.
Template Sequence		A	D	Y	I	F	P	G	F	D	Q	L	V	S	Q	V	A	K	L	R	Y	R	S	G	G	Q	F	T	A	P	L	V	V	R	M	P	S	G	G	G	V	.	.	R	G	G	H	H	H	S	Q	S	P	E	A	H	F	V	H	T	A	G	L	K	V	V	A	.	.	V	S	T	P	Y	D	A	K	G	L	L	K
Template Known Secondary structure		G	G	G		G	G	G							T	T	T	T					T	T	T	S	S												S	S	S	.	.	S		G	G	G	S	S									T	S	T	T						.	.			S
Template Predicted Secondary structure																																										.	.																									.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	D	H	A	L	G	T	L	H	A	G	G	V	H	I	N	C	P
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		A	A	I	R	.	.	.	.	.	D	E	D	P	V	V	F	L	E	P
Template Known Secondary structure						.	.	.	.	.		S	S
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		160	.	.	.						.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions