Job Description P17109 Confidence 99.48% Date Thu Jan 5 11:35:57 GMT 2012 Rank 62 Aligned Residues 116 % Identity 22% Template d1umda_ SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.90

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		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.						.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																		.				.
Query SS confidence																					.	.	.	.	.																		.				.
Query Sequence		R	G	A	S	G	I	D	G	L	L	S	T	A	A	G	V	Q	R	A	.	.	.	.	.	S	G	K	P	T	L	A	I	V	G	D	L	S	A	L	Y	D	.	L	N	A	.	L	A	L	L	R	Q	V	S	A	P	L	V	L	I	V	V	N	N	N	G	G	Q	I	F	S	L	L	P	T	P	Q	S	E	R
Query Conservation																					.	.	.	.	.																		.				.
Alig confidence																					.	.	.	.	.																		.				.																				.
Template Conservation																																																																			.
Template Sequence		T	V	A	S	P	I	A	S	H	V	P	P	A	A	G	A	A	I	S	M	K	L	L	R	T	G	Q	V	A	V	C	T	F	G	D	G	A	T	S	E	G	D	W	Y	A	G	I	N	F	A	A	V	Q	G	A	P	A	V	F	I	A	E	N	N	F	.	Y	A	I	S	V	D	Y	R	H	Q	T	H	S	P
Template Known Secondary structure					S	S	T	T	T	T														T	T											T	G	G	G	G	S													T	T		S									S	.			T	T								S	S	S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.			.	.	.	.	.	.	.	520	.	.	.	.	.					.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.														.	.	.	.
Query SS confidence																													.	.														.	.	.	.
Query Sequence		E	R	F	Y	L	M	P	Q	N	V	H	F	E	H	A	A	A	M	F	E	L	K	Y	H	R	P	Q	.	.	N	W	Q	E	L	E	T	A	F	A	D	A	W	.	.	.	.	R	T	P	T	T	T	V	I	E	M	V	V	N	D
Query Conservation																													.	.														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																		.	.														.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	T	I	A	D	K	A	H	A	F	G	I	P	G	Y	L	V	D	G	M	D	V	L	A	S	Y	Y	V	V	K	E	A	V	E	R	A	R	R	G	E	G	P	S	L	V	E	L	R	V	Y	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		S	G	G	G	G	G	G	T	T	S							T	T																		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions