Job Description P17109 Confidence 100.00% Date Thu Jan 5 11:35:57 GMT 2012 Rank 37 Aligned Residues 187 % Identity 14% Template d1ovma3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 2.65

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		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		R	R	D	A	F	G	E	A	Q	L	A	H	R	I	C	D	Y	L	P	E	Q	G	Q	L	F	V	G	N	S	L	V	V	R	L	I	D	A	L	S	Q	L	P	A	G	Y	P	V	Y	S	N	R	G	A	S	G	I	D	G	L	L	S	T	A	A	G	V	Q	R	A	.	S	G	K	P	T	L	A	I	V	G
Query Conservation																																																																							.
Alig confidence																																							.																																.
Template Conservation																																							.
Template Sequence		P	D	G	S	L	T	Q	E	N	F	W	R	T	L	Q	T	F	I	R	P	G	D	I	I	L	A	D	Q	G	T	S	A	F	G	A	I	D	.	L	R	L	P	A	D	V	N	F	I	V	Q	P	L	W	G	S	I	G	Y	T	L	A	A	A	F	G	A	Q	T	A	C	P	N	R	R	V	I	V	L	T	G
Template Known Secondary structure				S	B																T	T							T	T							T	T	.					S	S							T	T	T			T	T														T	T	S
Template Predicted Secondary structure																																							.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.					.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		D	L	S	A	L	Y	D	L	N	A	L	A	L	L	R	Q	V	S	A	P	L	V	L	I	V	V	N	N	N	G	G	Q	I	F	S	L	L	P	T	P	Q	S	E	R	E	R	F	Y	L	M	P	Q	N	V	H	F	E	H	A	A	A	M	F	E	L	.	.	.	.	K	Y	H	R	P	Q	N	W	Q	E	L
Query Conservation																																																																			.	.	.	.
Alig confidence																																														.	.	.	.																		.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		D	G	A	A	Q	L	T	I	Q	E	L	G	S	M	L	R	D	K	Q	H	P	I	I	L	V	L	N	N	E	G	Y	T	V	E	R	A	I	H	G	A	E	Q	R	Y	.	.	.	.	N	D	I	A	L	W	N	W	T	H	I	P	Q	A	L	S	L	D	P	Q	S	E	C	W	R	V	S	E	A	E	Q	L
Template Known Secondary structure									T	T								T	T										S	S	S								S		T	T		G	G	.	.	.	.	G							G	G	G	S	T	T	T	S		S	S										B
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.					.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	A	F	A	D	A	W	R	T	P	T	T	T	V	I	E	M	V	V	N	D	T	D	G	A	Q	T	L	Q	Q	L	L	A	Q	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	V	L	E	K	V	A	H	H	E	R	L	S	L	I	E	V	M	L	P	K	A	D	I	P	P	L	L	G	A	L	T	K	A	L	E
Template Known Secondary structure									T	T		S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions