 |
Job Description | P17109 | Confidence | 92.22% | Date | Thu Jan 5 11:35:57 GMT 2012 |
Rank | 114 | Aligned Residues | 72 |
% Identity | 14% | Template | d1m2ka_ |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Sir2 family of transcriptional regulators
|
Resolution | 1.47 |
|
 |
  |   |
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
|
. | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | A | T | S | E | L | Q | Q | A | Q | I | V | V | Q | L | G | S | S | L | T | G | K | R | L | L | Q | W | . |
. |
Q | A | S | C | E | P | E | E | Y | W | I | V | D | D | I | E | G | R | L | D | P | A | H | H | R | G | R | R | L | I | A | N | I | A | D | W | L | E | L | H | P | A | E | K | R | Q |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   | . | . |   |
|   |   |
|   |
|   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
D | R | A | M | R | E | V | E | R | A | D | V | I | I | V | A | G | T | S | A | V | V | Q | P | A | A | S | L | P | L | I | V | K | Q | R | G | G | A | I | I | E | I | N | P | D | E | T | P | L | T | P | I | . |
. |
A | D | Y | S | L | R | G | K | A | G | E | V | M | D | E | L | V | R | H | V | R | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  | S |
|
| S |
| S | T | T | G | G | G |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |
|
| T | T | G | G | G | . | . |
| S |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|