Return to main results Retrieve Phyre Job Id

Job DescriptionP17109
Confidence41.13%DateThu Jan 5 11:35:57 GMT 2012
Rank221Aligned Residues108
% Identity13%Templatec3fkjA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:putative phosphosugar isomerases; PDBTitle: crystal structure of a putative phosphosugar isomerase (stm_0572) from2 salmonella typhimurium lt2 at 2.12 a resolution
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20......... 30.........40...... ...50.........60.........70.........80.
Predicted Secondary structure 





.







.







Query SS confidence 

























.
















.


































Query Sequence  SAFNRRWAAVILEALTRHGVRHICIA. PGSRSTPLTLAAAENSA. FIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGT
Query Conservation         
  
   
   

  


 .

     
  

     .
  
   

  
   
 



 

   
   
 

Alig confidence 

























.
















.


































Template Conservation   
        
   
       
   
 


   
                                    


 

 

Template Sequence  SVAHENARRIISDILGKQNIERVWFVGCGGSLTGFWPGKYFLDCEASKLAVGYITSNEFVHATPKALGKNSVVILASQQG
Template Known Secondary structure 
TTS


STTT
SS
S

TT
STTSSS
Template Predicted Secondary structure 


















Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  AVANLYPALIEAGLTGEKLILLTADRPPEL
Query Conservation 
  
    
  
     


 
 
      
Alig confidence 





























Template Conservation   
     
   
   
   
 

    
 
Template Sequence  NTAETVAAARVAREKGAATIGLVYQPDTPL
Template Known Secondary structure 

T
SSTT
Template Predicted Secondary structure 










Template SS confidence 





























   82.......90.........100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions