Job Description P17109 Confidence 41.50% Date Thu Jan 5 11:35:57 GMT 2012 Rank 220 Aligned Residues 35 % Identity 17% Template c3c01H_ PDB info PDB header:membrane protein, protein transport Chain: H: PDB Molecule:surface presentation of antigens protein spas; PDBTitle: crystal structural of native spas c-terminal domain Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	Q	K	R	G	V	V	V	A	G	R	M	S	A	E	E	G	K	K	V	A	L	W	A	Q	T	L	G	W	P	L	I	G	D	V
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		E	L	M	P	I	P	M	I	S	V	.	Y	E	T	N	Q	R	A	L	A	V	R	A	Y	A	E	K	V	G	V	P	V	I	V	D	I
Template Known Secondary structure		T	T		S							.																		T
Template Predicted Secondary structure												.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions