Job Description P17109 Confidence 24.90% Date Thu Jan 5 11:35:57 GMT 2012 Rank 282 Aligned Residues 84 % Identity 13% Template c2zkrf_ PDB info PDB header:ribosomal protein/rna Chain: F: PDB Molecule:rna expansion segment es7 part iii; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.			.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		Y	D	L	N	A	L	A	L	L	R	Q	V	S	A	P	L	V	L	I	V	V	N	N	N	G	G	Q	I	F	S	L	L	P	T	P	Q	S	E	R	E	R	F	Y	L	M	P	Q	N	V	.	.	H	F	E	H	A	A	A	M	F	E	L	K	Y	H	R	P	Q	N	W	Q	E	L	E	T	A	F	A	D	A
Query Conservation																																																			.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.																												.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Sequence		A	G	V	N	T	V	T	T	L	V	E	N	K	K	A	Q	L	V	V	I	A	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	P	I	E	L	V	V	F	L	P	A	L	C	R	K	M	G	V	P	Y	C	I	I	K	G	K	A	R	L	G	H	L	V	H	.	.
Template Known Secondary structure		B	S										T	T			S						S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	T	T	T	T										T							S										T	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	T	P	T	T	T	V	I	E	M	V	V	N	D	T	D	G	A	Q	T	L	Q	Q	L	L	A	Q	V	S
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	R	K	T	C	T	T	V	A	F	T	Q	V	N	S	E	D	K	G	A	L	A	K	L	V	E	A	I	R
Template Known Secondary structure		.	.	S	S			S					T	T		S	S	T	T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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