Job Description P17109 Confidence 20.48% Date Thu Jan 5 11:35:57 GMT 2012 Rank 307 Aligned Residues 104 % Identity 16% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.														.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	W	A	A	V	I	L	E	A	L	T	R	H	G	V	R	H	I	C	I	A	P	G	S	R	S	T	P	L	T	L	A	A	A	E	N	S	A	F	.	.	.	.	.	.	I	H	H	T	H	F	D	E	R	G	L	G	H	L	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	K	V
Query Conservation																																										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T	D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G
Template Known Secondary structure														T	T								S	T															T		S	S	S										S	S										T	T	S	T	T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	Q	P	V	A	V	I	V	T	S	G	T	A	V	A	N	L	Y	P	A	L	I	E	A	G	L	T	G	E	K	L	I	L	L	T	A	D	R	P	P	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L
Template Known Secondary structure			T	T								S	S	S															T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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