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Job Description | P17109 | Confidence | 96.50% | Date | Thu Jan 5 11:35:57 GMT 2012 |
Rank | 97 | Aligned Residues | 88 |
% Identity | 20% | Template | c2xt6B_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:2-oxoglutarate decarboxylase; |
PDBTitle: crystal structure of mycobacterium smegmatis alpha-ketoglutarate2 decarboxylase homodimer (orthorhombic form)
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Resolution | 2.74 Å |
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436 | . | . | . | 440 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
T | L | A | I | V | G | D | L | S | A | L | . |
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V | L | I | V | V | N | N | N | G | G | Q | I | F | S | L | L | P | T | P | Q | S | E | R | E | R | F | Y | L | M | P | Q | N | V | H | F | E | H | A | A | A | M | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | L | M | L | H | G | D | A | A | F | A | G | Q | G | V | V | A | E | T | L | N | L | A | L | L | R | . |
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Q | I | G | F | T | T | A | P | T | D | S | R | S | . |
S | E | Y | C | T | D | V | A | K | M | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
639 | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | |
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. | 680 | . | . | . | . | . | . | . | . | . | 690 | . | |
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505 | . | . | . | . | 510 | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | L | K | Y | H | R | P | Q | . |
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N | W | Q | E | L | E | T | A | F | A | D | A | W | . |
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R | T | P | T | T | T | V | I | E | M | V | V | N | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | A | P | I | F | H | V | N | G | D | D | P | E | A | C | A | W | V | A | R | L | A | V | D | F | R | Q | A | F | K | K | D | V | V | I | D | M | L | C | Y | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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703 | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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