Job Description P17109 Confidence 50.59% Date Thu Jan 5 11:35:57 GMT 2012 Rank 192 Aligned Residues 180 % Identity 12% Template c2wltA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:l-asparaginase; PDBTitle: the crystal structure of helicobacter pylori l-asparaginase2 at 1.4 a resolution Resolution 1.40 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.										.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.
Query Sequence		V	A	V	I	V	T	S	G	T	A	V	A	N	L	Y	P	A	L	I	E	A	G	L	T	G	E	K	L	I	L	L	T	A	D	R	P	P	E	L	I	D	C	G	A	N	Q	A	I	R	Q	P	G	M	F	A	.	.	.	.	.	.	.	.	.	S	H	P	T	H	S	I	S	L	P	R	P	T	Q	D	I
Query Conservation																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	V	I	T	H	G	T	D	T	L	E	E	S	A	Y	F	L	N	L	V	L	H	S	T	K	P	V	V	L	V	G	A	M	R	N	A	S	S	L	S	A	D	G	A	L	N	L	Y	E	A	V	S	V	A	V	N	E	K	S	A	N	K	G	V	L	V	V	M	D	D	T	I	F	S	V	R	E	V	V
Template Known Secondary structure									S	S	S															S	S								S	S		T	T	S	T	T		S															G	G	G	T	T	S		S					T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	R	W	L	V	S	T	I	D	H	A	L	G	T	L	H	A	G	G	V	H	I	N	C	P	F	A	E	P	L	Y	G	E	M	D	D	T	G	L	S	W	Q	Q	R	L	G	D	W	W	Q	D	D	K	P	W	L	R	E	A	P	R	L	E	S	E	K	Q	R	D	W	F	F	W	R	Q	K	R	G	V
Query Conservation
Alig confidence																																																																			.
Template Conservation																																																																			.
Template Sequence		K	T	H	T	T	H	V	S	T	F	K	A	L	N	S	G	A	I	G	S	V	Y	Y	G	K	T	R	Y	Y	M	Q	P	L	R	K	H	T	T	E	S	E	F	S	L	S	Q	L	K	T	P	L	P	K	V	D	I	I	Y	T	H	A	G	M	T	P	.	D	L	F	Q	A	S	L	N	S	H	A	K	G	V
Template Known Secondary structure				S	S	S		T	T					T	T	T			S					T	T										S			G	G	G		S			G	G	G			S	S											T	T			T	.									T	T		S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.
		224	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		V	V	A	G	R	M	.	.	.	S	A	E	E	G	K	K	V	A	L	W	A	Q	T	L	G	W	P	L	I	G	D	V	L
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		V	I	A	G	V	G	N	G	N	V	S	A	G	F	L	K	A	M	Q	E	A	S	Q	M	G	V	V	I	V	R	S	S	R
Template Known Secondary structure						B	T	T	T	B															T	T								S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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