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Job DescriptionP17109
Confidence100.00%DateThu Jan 5 11:35:57 GMT 2012
Rank11Aligned Residues525
% Identity14%Templatec2q27B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxalyl-coa decarboxylase; PDBTitle: crystal structure of oxalyl-coa decarboxylase from escherichia coli
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  RRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLY
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Template Sequence  TDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE. GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGL
Template Known Secondary structure  TT




TTTT.T

SSSS

S
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   8.10.........20.........30.........40.... .....50.........60.........70.........80......
 
   88.90.........100.........110. ........120.........130.........140.........150.........160.....
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Query Sequence  PALIEAGLTGEKLILLTADRPPEL. . IDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVH
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Template Sequence  TALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIA. . . LARAIRVSVSGRPGGVY
Template Known Secondary structure  T



TTS

TT


GGGSS

SGGG...SSS

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   87..90.........100.........110.........120.........130.........140...... ...150.........160...
 
   166...170.........180.........190.........200.........210.........220.........230. ........240...
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Query Sequence  INCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSA. . EEGKKVALWAQT
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Template Sequence  LDLPAN. . . . . . VLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIES
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TT



SSSS





T
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T
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   164..... 170.........180.........190.........200.........210.........220.........230.......
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  LGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRG
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Template Sequence  AQIPFLPMSMAKGILEDTHPL. . SAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIA
Template Known Secondary structure  TT


GGGTTSS
TT
TT..B
GGG
SS


SGGGGGGTTTS
TT
S
GGGTTSSS

S
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   238.240.........250........ .260.........270.........280.........290.........300.........310.....
 
   324.....330.........340 .........350.........360.........370.........380.... .....390
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Query Sequence  RRLIANIADWLELHPAE. . . . . . . . . . . KRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQG. . QLFVGN
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Template Sequence  VPVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEG
Template Known Secondary structure  S
T







SSB
T
TT
S
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   316...320.........330.........340.........350.........360.........370.........380.........390.....
 
   391........400.........410.........420.........430.........440.........450.........460.........470
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Query Sequence  SLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNN
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Template Sequence  ANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNG
Template Known Secondary structure  SS


SSS
STTTT
TT



TTTGGGT


S
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   396...400.........410.........420.........430.........440.........450.........460.........470.....
 
   471........480.........490.........500.........510.........520.........530.........540....
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Query Sequence  GGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQ
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Template Sequence  GIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTE
Template Known Secondary structure  BSS
S



TTSS



TTB

TT

GGGGGGGGT

STS
B
TTS


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   476...480.........490.........500.........510.........520.........530.........540.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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