Job Description P17109 Confidence 100.00% Date Thu Jan 5 11:35:57 GMT 2012 Rank 5 Aligned Residues 522 % Identity 14% Template c2panF_ PDB info PDB header:lyase Chain: F: PDB Molecule:glyoxylate carboligase; PDBTitle: crystal structure of e. coli glyoxylate carboligase Resolution 2.70 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		R	R	W	A	A	V	I	L	E	A	L	T	R	H	G	V	R	H	I	C	I	A	P	G	S	R	S	T	P	L	T	L	A	A	A	E	N	S	A	F	I	H	H	T	H	F	D	E	R	G	L	G	H	L	A	L	G	L	A	K	V	S	.	K	Q	P	V	A	V	I	V	T	S	G	T	A	V	A	N	L
Query Conservation																																																																.
Alig confidence																																																																.
Template Conservation
Template Sequence		X	R	A	V	D	A	A	X	Y	V	L	E	K	E	G	I	T	T	A	F	G	V	P	G	A	A	I	N	P	F	Y	S	A	X	R	K	H	G	G	I	R	H	I	L	A	R	H	V	E	G	A	S	H	X	A	E	G	Y	T	R	A	T	A	G	N	I	G	V	C	L	G	T	S	G	P	A	G	T	D	X
Template Known Secondary structure															T	T										G	G	G																			S	S															S	T	T									S	T					T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	A	L	I	E	A	G	L	T	G	E	K	L	I	L	L	T	A	D	R	P	P	E	L	I	D	C	G	A	N	Q	A	I	R	Q	P	G	M	F	A	S	H	P	T	H	S	I	S	L	P	R	P	T	Q	D	I	P	A	R	W	L	V	S	T	I	D	H	A	L	G	T	L	H	A	G	G	V	H	I
Query Conservation
Alig confidence																																																													.	.	.
Template Conservation																																																													.	.	.
Template Sequence		I	T	A	L	Y	S	A	S	A	D	S	I	P	I	L	C	I	T	G	Q	A	P	R	A	R	L	H	K	E	D	F	Q	A	V	D	I	E	A	I	A	K	P	V	S	K	X	A	V	T	V	R	E	A	A	L	V	P	R	V	.	.	.	L	Q	Q	A	F	H	L	X	R	S	G	R	P	G	P	V	L	V
Template Known Secondary structure											T	T												G	G	G	T	T	T	T		T	T									G	G	G	S	S							S	G	G	G					.	.	.										S	S	S
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		N	C	P	F	A	E	P	L	Y	G	E	M	D	D	T	G	L	S	W	Q	Q	R	L	G	D	W	W	Q	D	D	K	P	W	L	R	E	A	P	R	L	E	S	E	K	Q	R	D	W	F	F	W	R	Q	K	R	G	V	V	V	A	G	R	M	.	.	S	A	E	E	G	K	K	V	A	L	W	A	Q	T	L
Query Conservation																																																																	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																																											.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	P	F	D	V	Q	V	A	E	I	.	.	.	.	.	.	.	.	.	.	E	F	D	P	D	X	Y	E	P	L	P	V	Y	K	P	A	A	S	R	X	Q	I	E	K	A	V	E	X	L	I	Q	A	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T
Template Known Secondary structure										S			.	.	.	.	.	.	.	.	.	.				G	G	G																									T		S	S												T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.											.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.							.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		G	W	P	L	I	G	D	V	L	S	Q	T	G	Q	P	L	P	C	A	D	L	W	.	.	.	.	.	.	L	G	N	A	K	A	T	S	E	L	Q	Q	A	Q	I	V	V	Q	L	G	S	S	L	T	G	K	R	L	L	Q	W	Q	A	S	C	E	P	E	E	Y	W	I	V	D	D	I	E	G	R	L	D	P
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	P	V	I	P	T	L	X	G	W	G	C	I	P	D	D	H	E	L	X	A	G	X	V	G	L	Q	T	A	H	R	Y	G	N	A	T	L	L	A	S	D	X	V	F	G	I	G	N	R	F	A	N	R	H	T	G	S	V	E	K	Y	T	E	G	R	K	I	V	H	I	D	I	E	P	T	Q	I	G	R
Template Known Secondary structure		T							T	T	T	T	T	S	S		T	T	S	T	T	B					S	S	S	S													S						S									S	S						T	T								S		G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.												.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	H	R	G	R	R	L	I	A	N	I	A	D	W	L	E	L	H	P	.	.	.	.	.	.	.	.	.	.	.	A	E	K	R	Q	P	W	C	V	E	I	P	R	L	A	E	Q	A	M	Q	A	V	I	A	R	R	D	A	F	G	E	A	Q	L	A	H	R	I	C	D	Y	L	P	E	Q	G	Q	L	F
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	C	P	D	L	G	I	V	S	D	A	K	A	A	L	T	L	L	V	E	V	A	Q	E	X	Q	K	A	G	R	L	P	C	R	K	E	W	V	A	D	C	Q	Q	R	K	R	T	L	L	R	K	T	H	F	D	N	V	P	V	K	P	Q	R	V	Y	E	E	X	N	K	A	F	G	R	D	V	C	Y	V
Template Known Secondary structure		S	S			S	S																							T	T		S															T	T	S									S	S	B													S		T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		V	G	N	S	L	V	V	R	L	I	D	A	L	S	Q	L	P	A	G	Y	P	V	Y	S	N	R	G	A	S	G	I	D	G	L	L	S	T	A	A	G	V	Q	R	A	.	S	G	K	P	T	L	A	I	V	G	D	L	S	A	L	Y	D	L	N	A	L	A	L	L	R	Q	V	S	A	P	L	V	L	I	V
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		T	T	I	G	L	S	Q	I	A	A	A	Q	X	L	H	V	F	K	D	R	H	W	I	N	C	G	Q	A	G	P	L	G	W	T	I	P	A	A	L	G	V	C	A	A	D	P	K	R	N	V	V	A	I	S	G	D	F	D	F	Q	F	L	I	E	E	L	A	V	G	A	Q	F	N	I	P	Y	I	H	V	L
Template Known Secondary structure				S	S														S	T	T	S					T	T	T			T	T														T	T															T	G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.											.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.					.	.	.	530	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Query Sequence		V	N	N	N	G	G	Q	I	F	S	L	L	P	T	P	Q	S	.	.	.	.	.	.	.	.	.	.	E	R	E	R	F	Y	L	M	P	Q	N	V	H	F	E	H	A	A	A	M	F	E	L	K	Y	H	R	P	Q	N	W	Q	E	L	E	T	A	F	A	D	A	W	R	.	.	.	.	T	P	T	T	T	V
Query Conservation																			.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Template Conservation
Template Sequence		V	N	N	A	Y	L	G	L	I	R	Q	S	Q	R	A	F	D	X	D	Y	C	V	Q	L	A	F	E	N	I	N	S	S	E	V	N	G	Y	G	V	D	H	V	K	V	A	E	G	L	G	C	K	A	I	R	V	F	K	P	E	D	I	A	P	A	F	E	Q	A	K	A	L	X	A	Q	Y	R	V	P	V	V
Template Known Secondary structure					S	B								G	G	G	G	T				S		B						T	T		S	T	T	T	T												T	T								S	G	G	G																	S
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
		533	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	M	V	V	N	D	T	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	V	I	L	E	R	V	T	N
Template Known Secondary structure						B		S
Template Predicted Secondary structure
Template SS confidence
		551	.	.	.	.	.	.	.	.	560