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Job Description | P17109 | Confidence | 31.32% | Date | Thu Jan 5 11:35:57 GMT 2012 |
Rank | 254 | Aligned Residues | 107 |
% Identity | 9% | Template | c2nyaF_ |
PDB info |
PDB header:oxidoreductase | Chain: F: PDB Molecule:periplasmic nitrate reductase; |
PDBTitle: crystal structure of the periplasmic nitrate reductase2 (nap) from escherichia coli
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Resolution | 2.50 Å |
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206 | . | . | . | 210 | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
L | E | S | E | K | Q | R | D | W | F | F | W | R | . |
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L | W | L | G | N | A | K | A | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | Q | A | F | D | V | M | E | E | K | F | K | T | A | L | K | E | K | G | P | E | S | I | G | M | F | G | S | G | Q | W | T | I | W | E | G | Y | A | A | S | K | L | F | K | A | G | F | R | S | N | N | I | D | P | N | A | R | H | C | M | A | S | A | V | V | G | F | M | R | T | F | G | M | D | E | P | M | G | C | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
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274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | E | L | Q | Q | A | Q | I | V | V | Q | L | G | S | S | L | T | G | K | R | L | L | Q | W | Q | A | S | . |
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C | E | P | E | E | Y | W | I | V | D | D | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | D | I | E | Q | A | D | A | F | V | L | W | G | A | N | M | A | E | M | H | P | I | L | W | S | R | I | T | N | R | R | L | S | N | Q | N | V | T | V | A | V | L | S | T | Y |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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