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Job DescriptionP17109
Confidence100.00%DateThu Jan 5 11:35:57 GMT 2012
Rank22Aligned Residues514
% Identity18%Templatec2nxwB_
PDB info PDB header:lyaseChain: B: PDB Molecule:phenyl-3-pyruvate decarboxylase; PDBTitle: crystal structure of phenylpyruvate decarboxylase of azospirillum2 brasilense
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  RWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYP
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Template Sequence  KLAEALLRALKDRGAQAMFGIPGDFALPFFKVAEETQILPLHTLSHEPAVGFAADAAARYSSTLGVAAVTYGAGAFNMVN
Template Known Secondary structure  TT





GGG
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TTTT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  ALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINC
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Template Sequence  AVAGAYAEKSPVVVISGAPGTTELLDTQFQ. . . . . . VFKEITVAQARLDDPAKAPAE. . . IARVLGAARAQS. RPVYLEI
Template Known Secondary structure  TT



TT



......TT
S



TTT...T.S
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   82.......90.........100.........110. ........120.........130.. .......140.... .....150.
 
   169170.........180.........190.........200.........210.........220......... 230.........240......
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Query Sequence  PFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRM. . SAEEGKKVALWAQTLGW
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Template Sequence  PRNM. . . . . . . . . . . . VNAEVEPVGDDPAWPVDRDALAACADEVLAAMRSATSPVLMVCVEVRRYGLEAKVAELAQRLGV
Template Known Secondary structure  GGG............TT













SS
TT

S
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   164... ..170.........180.........190.........200.........210.........220.........230.
 
   247..250.........260... ......270.........280.........290.........300.........310.........320
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Query Sequence  PLIGDVLSQTGQPLPCA. . . . . . DLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAH
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Template Sequence  PVVTTFMGRGLLADAPTPPLGTYIGVAGDAEITRLVEESDGLFLLGAILSDTNFAVSQRKIDLRKTIHAFDRAVTLGYHT
Template Known Secondary structure 

GGGTTTTTTSSS

S
B

GGGS
T
SS

B
SSTTSB
GGGS
TTT
TTTT
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   232.......240.........250.........260.........270.........280.........290.........300.........310.
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  HRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDAL
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Template Sequence  YADIPLAGLVDALLERLPPSDRTTRGKEPHA. YPTGLQADGEPIAPMDIARAVNDRVRAGQEPLLIAADMGDCLFTAMDM
Template Known Secondary structure 
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TTS






TTS



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SSSB

TT




SSTTS
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   312.......320.........330.........340.. .......350.........360.........370.........380.........390
 
   401........410.........420.........430. ........440.........450.........460.........470.........
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Query Sequence  SQLPAGYPVYSNRGASGIDGLLSTAAGVQRA. SGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLP
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Template Sequence  I. . . . DAGLMAPGYYAGMGFGVPAGIGAQCVSGGKRILTVVGDGAFQMTGWELGNCRRLGIDPIVILFNNASWEMLRTFQ
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TTT

TT
STT

GGGGGGT



SB

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   391 ........400.........410.........420.........430.........440.........450.........460......
 
   480.........490.........500.........510.........520......... 530.........540.........550....
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Query Sequence  TPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPT. TTVIEMVVNDTDGAQTLQQLLAQVS
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Template Sequence  P. . . . . ESAFNDLDDWRFADMAAGMGGDGVRVRTRAELKAALDKAFATRGRFQLIEAMIPRGVLSDTLARFVQGQK
Template Known Secondary structure  T.....T
GGGB




GGGT

B

SS


TT


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   467 ..470.........480.........490.........500.........510.........520.........530.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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