Job Description P17109 Confidence 82.34% Date Thu Jan 5 11:35:57 GMT 2012 Rank 131 Aligned Residues 70 % Identity 13% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		209	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure											.	.													.
Query SS confidence											.	.													.
Query Sequence		E	K	Q	R	D	W	F	F	W	.	.	R	Q	K	R	G	V	V	V	A	G	R	M	.	S	A	E	E	G	K	K	V	A	L	W	A	Q	T	L	G	W	P	L	I	G	D	V	L	S	Q	T	G	Q	P	L	P	C	A	D	L	W	L	G	N	A	K	A	T	S	E	L	Q	Q	A	Q	I	V	V	Q
Query Conservation											.	.													.
Alig confidence											.	.													.																				.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	.	.	.	.	.	.	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V
Template Known Secondary structure											T	S	S	S					B						S	S	S		S											T	T				.	.	.	.	.	.				S	S				T	T													T	T		S
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions