Return to main results Retrieve Phyre Job Id

Job DescriptionP17109
Confidence21.18%DateThu Jan 5 11:35:57 GMT 2012
Rank301Aligned Residues75
% Identity23%Templatec2fugC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210........ .220......... 230.........240.........250.........260.........270.........280..
Predicted Secondary structure 
..





.
























Query SS confidence 












. .










.




















































Query Sequence  LESEKQRDWFFWR. . QKRGVVVAGRM. SAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIV
Query Conservation            
  ..
 




 
  .   
   
  


 

 

                           
  

 
Alig confidence 












..










.



















......


























Template Conservation 



  

 

       
    
   
 
       
    

 

......
                  

  

 
Template Sequence  EEAFLALKEGLKEARGEEVGLYLAHDATLEEGLLASELAKALKTPHL. . . . . . DFQGRTAAPASLFPPASLEDLLQADFA
Template Known Secondary structure  TTSSSSS

TT

SSS

......TT

SS
TTSS
B


S
Template Predicted Secondary structure 











......













Template SS confidence 















































































   323......330.........340.........350.........360......... 370.........380.........390......
 
   283...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  VQLG
Query Conservation 
 

Alig confidence 



Template Conservation 

 
Template Sequence  LVLG
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 



   397..400
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions