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Job DescriptionP17109
Confidence100.00%DateThu Jan 5 11:35:57 GMT 2012
Rank17Aligned Residues524
% Identity15%Templatec2ag1A_
PDB info PDB header:lyaseChain: A: PDB Molecule:benzaldehyde lyase; PDBTitle: crystal structure of benzaldehyde lyase (bal)- semet
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  RWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYP
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Template Sequence  TGGELVVRTLIKAGVEHLFGLHGAHIDTIFQACLDH. DVPIIDTRHEAAAGHAAEGYARAGAKLGVALVTAGGGFTNAVT
Template Known Secondary structure  T





GGG.T


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   5....10.........20.........30.........40 .........50.........60.........70.........80...
 
   8990.........100.........110......... 120.........130.........140.........150.........160.......
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Query Sequence  ALIEAGLTGEKLILLTADRPPELIDCGANQA. IRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHIN
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Template Sequence  PIANAWLDRTPVLFLTGSGALRDDETNTLQAGIDQVAXAAPITKWAHRVXATEHIPRL. . . VXQAIRAALSAPRGPVLLD
Template Known Secondary structure  T



STTTTS

TT

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GGG
S


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   84.....90.........100.........110.........120.........130.........140. ........150.........160
 
   168.170.........180.........190.........200.........210.........220......... 230.........240.....
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Query Sequence  CPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRM. . SAEEGKKVALWAQTLG
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Template Sequence  LPWDILXNQI. . . . . . . . DEDSVIIPDLVLSAHGARPDPADLDQALALLRKAERPVIVLGSEASRTARKTALSAFVAATG
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   161........170 .........180.........190.........200.........210.........220.........230..
 
   246...250.........260...... ...270.........280.........290.........300. ........310.........320
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Query Sequence  WPLIGDVLSQTGQPLPCADLW. . . . LGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASC. EPEEYWIVDDIEGRLDPAH
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Template Sequence  VPVFADYEGLSXLSGLPDAXRGGLVQNLYSFAKADAAPDLVLXLGARFGLNTGHGSGQLIPHSAQVIQVDPDACELGRLQ
Template Known Secondary structure 


GGGGGGGTTS
GGGGGGGGGGGGGT


SS

SSGGGTTTS
SSS
TTS
SSGGGTTSSS
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   233......240.........250.........260.........270.........280.........290.........300.........310..
 
   321........330........ .340.........350.........360.........370.........380.........
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Query Sequence  HRGRRLIANIADWLELHP. . . . . . . . . . . AEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVG
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Template Sequence  GIALGIVADVGGTIEALAQATAQDAAWPDRGDWCAKVTDLAQERYASIAAKSSSEHALHPFHASQVIAKHVDAGVTVVAD
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   313......320.........330.........340.........350.........360.........370.........380.........390..
 
   390.........400.........410.........420.........430. ........440.........450.........460......
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Query Sequence  NSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRA. . . SGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIV
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Template Sequence  GALTYLWLSEVXSRVKPGGFLCHGYLGSXGVGFGTALGAQVADLEAGRRTILVTGDGSVGYSIGEFDTLVRKQLPLIVII
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S


TT

TTTTT
GGGTTTT


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   393......400.........410.........420.........430.........440.........450.........460.........470..
 
   467..470.........480.........490. ........500.........510.........520.........530.........540....
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Query Sequence  VNNNGGQIFSLLPTPQSERERFYLM. PQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQ
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Template Sequence  XNNQSWGATLHFQQLAVGPNRVTGTRLENGSYHGVAAAFGADGYHVDSVESFSAALAQALAHNRPACINVAVALDPIPP
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B




TTS
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   473......480.........490.........500.........510.........520.........530.........540.........550.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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