Job Description P17109 Confidence 93.99% Date Thu Jan 5 11:35:57 GMT 2012 Rank 110 Aligned Residues 80 % Identity 11% Template c1pt9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial; PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue Resolution 2.42 Å

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		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.										260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																							.	.																	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Query Sequence		E	K	Q	R	D	W	F	F	W	R	Q	K	R	G	V	V	V	A	G	R	M	.	.	S	A	E	E	G	K	K	V	A	L	W	A	Q	T	L	G	.	.	.	.	.	W	P	L	I	G	D	V	L	S	Q	T	G	Q	P	.	.	.	.	.	.	.	.	.	L	P	C	A	D	L	W	L	G	N	A	K	A
Query Conservation																							.	.																	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	N	A	I	D	M	I	R	E	A	N	S	I	I	I	T	P	G	Y	G	L	C	A	A	K	A	Q	Y	P	I	A	D	L	V	K	M	L	T	E	Q	G	K	K	V	R	F	G	I	H	P	V	A	G	R	M	P	G	Q	L	N	V	L	L	A	E	A	G	V	P	Y	D	I	V	L	E	M	D	E	I
Template Known Secondary structure													S													T	T															T	T									T	T		S	S	S	T	T									T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	E	L	Q	Q	A	Q	I	V	V	Q	L	G	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	D	F	P	D	T	D	L	V	L	V	I	G	A	N
Template Known Secondary structure		G	G	G	G	G	G		S						S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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