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Job DescriptionP17109
Confidence100.00%DateThu Jan 5 11:35:57 GMT 2012
Rank21Aligned Residues511
% Identity14%Templatec1ovmC_
PDB info PDB header:lyaseChain: C: PDB Molecule:indole-3-pyruvate decarboxylase; PDBTitle: crystal structure of indolepyruvate decarboxylase from2 enterobacter cloacae
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  FNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVAN
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Template Sequence  TPYCVADYLLDRLTDCGADHLFGVPGDYNLQFLDHVIDSPDICWVGCANELNASYAADGYARCKGFA. ALLTTFGVGELS
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   3......10.........20.........30.........40.........50.........60......... 70.........80.
 
   86...90.........100.........110......... 120.........130.........140.........150.......
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Query Sequence  LYPALIEAGLTGEKLILLTADRPPELIDCGANQA. . . . . . . . IRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALG
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Template Sequence  AMNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGEFRHFYHMSEPITVAQAVLTEQNACYEI. . . DRVLTTMLR
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   82.......90.........100.........110.........120.........130.........140......... 150........
 
   158.160.........170.........180.........190.........200.........210.........220.........230. ....
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Query Sequence  TLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSA. . EEGK
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Template Sequence  ER. . RPGYLMLPADVAKKAAT. . . . . . . . . PPVNALTHKQAHADSACLKAFRDAAENKLAMSKRTALLADFLVLRHGLKH
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   159160 .........170....... ..180.........190.........200.........210.........220.......
 
   236...240.........250.........260.. .......270.........280.........290.........300.........
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Query Sequence  KVALWAQTLGWPLIGDVLSQTGQPLPC. . . . . . ADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIV
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Template Sequence  ALQKWVKEVPMAHATMLMGKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCVGTRFTDTLTAGFTHQLTPAQTIEV
Template Known Secondary structure  S


TTTTTSS
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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   310.........320.........330.........340.........350.........360.........370.........380.........
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Query Sequence  DDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVG
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Template Sequence  QPHAARVGDVWFTGIPMNQAIETLVELCKQHVHA. . . . . . . . . . . . . . . . . . . PDGSLTQENFWRTLQTFIRPGDIILAD
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SSTTS

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   308.310.........320.........330.........340. ........350.........360........
 
   390.........400.........410.........420.........430. ........440.........450.........460........
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Query Sequence  NSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRA. SGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVN
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Template Sequence  QGTSAFGAIDLR. LPADVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLN
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   383......390.... .....400.........410.........420.........430.........440.........450.........460.
 
   469470.........480.........490.........500..... ....510.........520.........530.........540....
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Query Sequence  NNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFE. . . . LKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQ
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Template Sequence  NEGYTVERAIH. . . . GAEQRYNDIALWNWTHIPQALSLDPQSECWRVSEAEQLADVLEKVAHHERLSLIEVMLPKADIPP
Template Known Secondary structure  SSS
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   462.......470.. .......480.........490.........500.........510.........520.........530.......
 
   545....550.....
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Query Sequence  TLQQLLAQVSH
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Template Sequence  LLGALTKALEA
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   538.540........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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