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Job Description | P17109 | Confidence | 45.30% | Date | Thu Jan 5 11:35:57 GMT 2012 |
Rank | 206 | Aligned Residues | 140 |
% Identity | 10% | Template | c1kjwA_ |
PDB info |
PDB header:neuropeptide | Chain: A: PDB Molecule:postsynaptic density protein 95; |
PDBTitle: sh3-guanylate kinase module from psd-95
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Resolution | 1.80 Å |
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220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
. | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | R | G | V | V | V | A | G | R | M | S | A | E | . |
E | G | K | K | V | A | L | W | A | Q | T | L | G | W | P | L | I | G | D | V | L | S | Q | T | G | Q | P | L | P | C | A | D | L | W | L | G | . |
N | A | K | A | T | S | E | L | Q | Q | A | Q | I | V | V | Q | L | G | S | S | L | T | G | K | . |
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R | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | R | P | I | I | I | L | G | P | T | K | D | R | A | N | D | D | L | L | S | E | F | P | D | K | F | G | S | C | V | P | H | T | T | R | P | K | R | E | Y | E | I | D | G | R | D | Y | H | F | V | S | S | R | E | K | M | E | K | D | I | Q | A | H | K | F | I | E | A | G | Q | Y | N | S | H | L | Y | G | T | S | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
534 | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . |
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295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | Q | W | Q | A | S | C | E | P | E | E | Y | W | I | V | D | D | I | E | G | R | L | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | S | V | R | E | V | A | E | Q | G | K | H | C | I | L | D | V | S | A | N | A | V | R | R | L | Q | A | A | H | L | H | P | I | A | I | F | I | R | P | R | S | L | E | N | V | L | E | I | N | K | R | I | T | E | E | Q | A | R | K | A | F | D | R | A | T | K | L | E | Q | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
614 | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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