Job Description P17109 Confidence 87.71% Date Thu Jan 5 11:35:57 GMT 2012 Rank 127 Aligned Residues 200 % Identity 18% Template c1ik6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate dehydrogenase; PDBTitle: 3d structure of the e1beta subunit of pyruvate2 dehydrogenase from the archeon pyrobaculum aerophilum Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		M	S	V	S	A	F	N	R	R	W	A	A	V	I	L	E	A	L	T	R	H	G	V	R	H	.	.	I	C	I	A	P	G	S	R	S	T	P	L	T	L	A	A	A	E	N	S	A	F	I	H	H	T	H	F	D	E	R	G	L	G	H	L	A	L	G	L	A	K	V	S	K	Q	P	V	A	V	I	V	T
Query Conservation																											.	.
Alig confidence																											.	.																	.	.
Template Conservation																																													.	.
Template Sequence		V	A	G	V	V	M	M	A	N	M	A	K	A	I	N	M	A	L	H	E	E	M	E	R	D	E	R	V	V	V	L	G	E	L	V	T	E	G	L	Y	E	R	F	.	.	G	P	E	R	V	I	D	T	P	L	N	E	G	G	I	L	G	F	A	M	G	M	A	M	A	G	L	K	P	V	A	E	I	Q	F
Template Known Secondary structure				S																							T	T								T	T	T	T						.	.		T	T	T						S															T	T
Template Predicted Secondary structure																																													.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	T	A	V	A	N	L	Y	P	A	L	I	E	A	G	L	T	G	E	K	L	I	L	L	T	A	D	R	P	P	E	L	I	D	C	G	A	N	Q	A	I	R	Q	P	G	M	F	A	S	H	P	T	H	S	I	S	L	P	R	P	T	Q	D	I	P	A	R	W	L	V	S	T	I	D	H	A	L	G	T
Query Conservation
Alig confidence				.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																				.	.	.	.
Template Conservation				.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																				.	.	.	.
Template Sequence		V	L	.	.	G	A	D	E	L	L	N	H	I	A	K	L	R	Y	K	A	P	L	V	V	R	T	P	V	G	S	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	F	V	H	T	P	G	L	V	.	.	V	V	M	P	S	T	P	Y	N	A	K	G	L	L	K	A	A	I	R	.	.	.	.
Template Known Secondary structure				.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.					T		T	T			.	.						S														.	.	.	.
Template Predicted Secondary structure				.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																				.	.	.	.
Template SS confidence
		88	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.														.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	A	G	G	V	H	I	N	C	P	F	A	E	P	L	Y	G	E	M	D	D	T	G	L	S	W	Q	Q	R	L	G	D	W	W	Q	D	D	K	P	W	L	R	E	A	P	R	L	E	S	E	K	Q	R	D	W	F	F	W	R	Q	K	R	G	V	V	V	A	G	R	M	S	A	E	E	G	K	K	V	A
Query Conservation
Alig confidence		.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation		.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		.	G	D	D	P	V	V	F	L	E	P	K	I	L	Y	R	A	P	R	E	E	V	P	E	G	D	Y	V	V	E	I	G	K	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	R	E	G	D	D	V	T	L	V	T	.	.	.	Y	G	A	V	V	H	K	A	L
Template Known Secondary structure		.	S	S	S								G	G	G	S	S									S	S					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S						.	.	.		T	T
Template Predicted Secondary structure		.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
			168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																						.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.
		239	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	A	Q	T	L	G	W	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	A	E	R	V	K	A	S	V
Template Known Secondary structure						T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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