Job Description P31133 Confidence 99.96% Date Thu Jan 5 11:47:16 GMT 2012 Rank 63 Aligned Residues 298 % Identity 8% Template d2onsa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.55

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																.	.												.																																.
Query SS confidence																.	.												.																																.
Query Sequence		Q	K	T	L	H	I	Y	N	W	S	D	Y	I	A	.	.	P	D	T	V	A	N	F	E	K	E	T	.	G	I	K	V	V	Y	D	V	F	D	S	N	E	V	L	E	G	K	L	M	A	G	S	T	G	F	D	L	V	V	P	.	S	A	S	F	L	E	R	Q	L	T	A	G	V	F	Q	P	L	D	K	S
Query Conservation																.	.												.																																.
Alig confidence																.	.												.											.																					.
Template Conservation																																								.
Template Sequence		N	V	K	L	K	V	F	H	A	G	S	L	T	E	P	M	K	A	F	K	R	A	F	E	E	K	H	P	N	V	E	V	Q	T	E	A	A	G	.	S	A	A	T	I	R	K	V	T	E	L	G	R	K	A	D	V	I	A	T	A	D	Y	T	L	I	Q	K	M	M	Y	P	E	F	A	N	W	T	I	M	F
Template Known Secondary structure											G	G	G																T	T										.										T	S					S					S	S									T	T	T	T		S
Template Predicted Secondary structure																																								.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	P	E	W	K	N	L	D	P	E	L	L	K	L	V	A	K	H	D	P	D	N	K	F	A	M	P	Y	M	W	A	T	T	G	I	G	Y	N	V	D	K	V	K	A	V	L	G	E	N	A	P	V	D	S	W	D	L	I	L	K	P	E	N	L	E	K	L	K	S	C	G	V	S	F	L	D	A	P	E
Query Conservation
Alig confidence																																															.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		A	K	N	Q	I	V	L	A	Y	R	N	D	S	R	Y	A	D	E	I	N	S	Q	N	W	Y	E	I	L	K	R	P	D	V	R	F	G	F	S	N	P	N	D	D	P	C	.	.	.	.	.	.	G	Y	R	S	L	M	A	I	Q	L	A	E	L	Y	Y	N	D	P	T	I	F	D	E	L	V	A	K	N	S
Template Known Secondary structure												T	T	S	T	T	T	T	T			T	T	T						T	S	T	T								T	T	T				.	.	.	.	.	.															T	T		T	T						T	G	G	G	B
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.									.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.
Query Sequence		E	V	F	A	T	V	L	N	Y	L	G	.	.	.	.	.	.	.	.	K	D	P	N	S	T	K	A	D	D	Y	T	G	P	A	T	D	L	L	L	K	L	R	P	N	I	R	Y	F	H	S	S	Q	Y	I	N	D	L	A	N	G	D	I	C	V	A	I	G	W	A	G	D	V	W	Q	A	S	N	R	A	K
Query Conservation													.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	R	F	S	E	D	N	G	S	Y	V	L	R	M	P	S	S	E	R	I	E	I	N	K	S	K	I	M	I	R	S	M	E	M	E	L	I	H	L	V	E	S	G	E	L	D	Y	F	F	I	Y	K	S	V	A	K	Q	H	G	F	N	F	V	E	L	P	V	E	I	D	L	S	S	P	D	Y	A	E	L
Template Known Secondary structure		S							T	T									G	G	G			B		T	T	T					S	S	G	G	G								T	S		S												T	T								T	T	T	S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	K	N	G	V	N	V	S	F	S	I	P	K	E	G	A	M	A	F	F	D	V	F	A	M	P	A	D	A	K	N	K	D	E	A	Y	Q	F	L	N	Y	L	L	R	P	D	V	V	A	H	I	S	D	H	V	F	Y	A	N	A	N	K	A	A	T	P	L	V	S	A	E	V	R	E	N	P	G	I
Query Conservation
Alig confidence								.																																																	.
Template Conservation								.																																																	.
Template Sequence		Y	S	K	V	K	V	.	V	L	A	N	G	K	E	V	T	G	K	P	I	V	Y	G	I	T	I	P	K	N	A	E	N	R	E	L	A	V	E	F	V	K	L	V	I	S	E	E	G	Q	E	I	L	R	E	L	.	G	Q	E	P	L	V	P	P	R	A	D	T	A	V	P	S	L	K	A	M	V	E	V
Template Known Secondary structure			T	T				.			T	T	S																T	T		T	T													S										T	.	T										S	S			G	G	G	T	T	T
Template Predicted Secondary structure								.																																																	.
Template SS confidence
		265	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions