Job Description P31133 Confidence 100.00% Date Thu Jan 5 11:47:16 GMT 2012 Rank 59 Aligned Residues 296 % Identity 18% Template d1xvya_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.74

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		32	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																																			.	.
Query SS confidence										.																																			.	.
Query Sequence		L	H	I	Y	N	W	S	D	.	Y	I	A	P	D	T	V	A	N	F	E	K	E	T	G	I	K	V	V	Y	D	V	F	D	S	N	E	V	L	E	G	K	L	M	.	.	A	G	S	T	G	F	D	L	V	V	P	S	A	S	F	L	E	R	Q	L	T	A	G	V	F	Q	P	L	D	K	S	K	L	P	E
Query Conservation										.																																			.	.
Alig confidence										.																																			.	.
Template Conservation
Template Sequence		I	V	I	Y	N	A	Q	H	E	N	L	V	K	S	W	V	D	G	F	T	K	D	T	G	I	K	V	T	L	R	N	G	G	D	S	E	L	G	N	Q	L	V	Q	E	G	S	A	S	P	A	D	V	F	L	T	E	N	S	P	A	M	V	L	V	D	N	A	K	L	F	A	P	L	D	A	A	T	L	A	Q
Template Known Secondary structure								S																																						G	G	G				S					S	S	S									T	T		B									T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	N	L	D	P	E	L	L	K	L	V	A	K	H	D	P	D	N	K	F	A	M	P	Y	M	W	A	T	T	G	I	G	Y	N	V	D	K	V	K	A	V	L	G	E	N	A	P	V	D	S	W	D	L	I	L	K	P	E	N	L	E	K	L	K	S	C	G	V	S	F	L	D	A	P	E	E	V	F	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Sequence		V	E	P	.	.	.	.	.	.	.	.	.	.	Q	Y	R	P	S	H	G	R	W	I	G	I	A	A	R	S	T	V	F	V	Y	N	P	A	K	L	S	D	A	Q	.	.	.	.	L	P	K	S	L	L	D	L	A	K	P	E	W	K	G	R	W	A	A	S	P	S	G	A	D	F	Q	A	I	V	S	A	L
Template Known Secondary structure		B		G	.	.	.	.	.	.	.	.	.	.	G	G	S		T	T		S	S														T	T	T	S		G	G	G	.	.	.	.			S	S	G	G	G	G	G	S	G	G	G	T	T	S					T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template SS confidence
		84	.	.											.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		T	V	L	N	Y	L	G	K	D	P	N	S	T	K	A	D	D	Y	T	G	P	A	T	D	L	L	L	K	L	R	P	N	I	R	.	Y	F	H	S	S	Q	Y	I	N	D	L	A	N	G	D	I	C	V	A	I	G	W	A	G	D	V	W	Q	A	S	N	R	A	K	E	A	K	N	G	V	N	V	S	F	S
Query Conservation																																				.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	L	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	A	T	L	A	W	L	K	A	M	K	T	N	F	T	A	Y	K	G	N	S	T	V	M	K	A	V	N	A	G	Q	V	D	S	G	V	I	Y	H	Y	Y	P	F	V	D	G	A	K	T	G	E	N	S	N	N	I	K	L	Y	Y	F
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.																			S	S											T	S	S	S						T									T	T		T	T	T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.														.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		268	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure				.																																														.
Query SS confidence				.																																														.
Query Sequence		I	P	.	K	E	G	A	M	A	F	F	D	V	F	A	M	P	A	D	A	K	N	K	D	E	A	Y	Q	F	L	N	Y	L	L	R	P	D	V	V	A	H	I	S	D	H	V	F	Y	.	A	N	A	N	K	A	A	T	P	L	V	S	A	E	V	R	E	N	P	G	I	Y	P	P	A	D	V	R	A	K	L
Query Conservation				.																																														.
Alig confidence				.																																														.										.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence		K	H	Q	D	P	G	A	F	V	S	I	S	G	G	G	V	L	A	S	S	K	H	Q	Q	Q	A	Q	A	F	I	K	W	I	T	G	K	Q	G	Q	E	I	L	R	T	N	N	A	F	E	Y	A	V	G	V	G	A	A	S	.	.	.	.	.	.	.	.	N	P	K	L	V	P	L	K	D	L	D	A	P	K
Template Known Secondary structure			T	T		G	G	G										B	T	T		T	T													S										S	S	S			B			B	T	T				.	.	.	.	.	.	.	.		T	T	S			G	G	G	G
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.									.	.	.	.	.	280	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		F	T	L	K	V	Q	D	.	P	K	I	D	R	V	R	T	R	A
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		V	D	A	A	Q	L	N	S	K	K	V	V	E	L	M	T	E	A
Template Known Secondary structure				G	G	G													T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions