Return to main results Retrieve Phyre Job Id

Job DescriptionP31133
Confidence100.00%DateThu Jan 5 11:47:16 GMT 2012
Rank1Aligned Residues341
% Identity100%Templated1a99a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  QKTLHIYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPE
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Template Sequence  QKTLHIYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPE
Template Known Secondary structure 

TT
S
TT

S





S

BTT
B



GGG
GG
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   2930.........40.........50.........60.........70.........80.........90.........100........
 
   109110.........120.........130.........140.........150.........160.........170.........180........
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Query Sequence  WKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFA
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Template Sequence  WKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFA
Template Known Secondary structure  GGGB
TTSGGG
S
TT

TTSTSGGG

S
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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   189190.........200.........210.........220.........230.........240.........250.........260........
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Query Sequence  TVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSI
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Template Sequence  TVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSI
Template Known Secondary structure  TTS
TT


TGGG


SSTTTS
ST
S


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   189190.........200.........210.........220.........230.........240.........250.........260........
 
   269270.........280.........290.........300.........310.........320.........330.........340........
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Query Sequence  PKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTL
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Template Sequence  PKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTL
Template Known Secondary structure 
TT

BTT
S
S

SBTTTGGGS
T
TTTS

TT

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   269270.........280.........290.........300.........310.........320.........330.........340........
 
   349350.........360.........
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Query Sequence  KVQDPKIDRVRTRAWTKVKSG
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Template Conservation                
  
 

Template Sequence  KVQDPKIDRVRTRAWTKVKSG
Template Known Secondary structure 




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   349350.........360.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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