Job Description P31133 Confidence 94.18% Date Thu Jan 5 11:47:16 GMT 2012 Rank 83 Aligned Residues 203 % Identity 17% Template c3e4rA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:nitrate transport protein; PDBTitle: crystal structure of the alkanesulfonate binding protein2 (ssua) from the phytopathogenic bacteria xanthomonas3 axonopodis pv. citri bound to hepes Resolution 2.01 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																									.	.	.						.
Query SS confidence																									.	.	.						.
Query Sequence		A	A	E	Q	K	T	L	H	I	Y	N	W	S	D	Y	I	A	P	D	T	V	A	N	.	.	.	F	E	K	E	T	.	G	I	K	V	V	Y	D	V	F	D	S	N	E	V	L	E	G	K	L	M	A	G	S	T	G	F	D	L	V	V	P	S	A	S	F	L	E	R	Q	L	T	A	G	V	F	Q	P	L
Query Conservation																									.	.	.						.
Alig confidence																									.	.	.						.																								.	.
Template Conservation																																																									.	.
Template Sequence		A	A	E	P	A	Q	L	R	I	G	Y	Q	K	A	V	S	S	L	V	L	A	K	Q	H	R	L	L	E	Q	R	F	P	R	T	K	I	T	W	V	E	F	P	A	G	P	Q	L	L	E	A	L	N	V	G	S	.	.	I	D	L	G	G	A	G	D	I	P	P	L	F	A	Q	A	A	G	A	D	L	L	Y
Template Known Secondary structure						S								T	T										T	T							T	T	S								S	S										T	T	S	.	.		S						S									T	T
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	S	K	L	P	E	W	K	N	L	D	P	E	L	L	K	L	V	A	K	H	D	P	D	N	K	F	A	M	P	Y	M	W	A	T	T	G	I	G	Y	N	V	D	K	V	K	A	V	L	G	E	N	A	P	V	D	S	W	D	L	I	L	K	P	E	N	L	E	K	L	K	S	C	G	V	S	F	L	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	W	V	P	P	T	P	K	A	E	T	I	L	V	P	S	K	.	.	.	.	.	.	.	.	.	S	A	L	R	T	V	A	D	L	.	.	.	.	.	.	.	K	G	K	R	I	A	F	Q	K	G	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G							T	T	.	.	.	.	.	.	.	.	.					S	G	G	G	G	.	.	.	.	.	.	.	T	T							T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
																												103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	E	V	F	A	T	V	L	N	Y	L	G	K	D	P	N	S	T	K	A	D	D	Y	T	G	P	A	T	D	L	L	L	K	L	R	P	N	I	R	Y	F	H	S	S	Q	Y	I	N	D	L	A	N	G	D	I	C	V	A	I	G	W	A	G	D	V	W	Q	A	S	N	R	A	K	E	A	K	N	G
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	H	N	L	L	L	R	V	L	A	K	S	G	L	S	M	R	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	L	Y	L	S	P	A	N	A	R	A	A	F	A	A	G	Q	V	D	A	W	A	I	W	D	P	W	Y	S	A	L	T	L	D	G	S	A	R	L	L	A
Template Known Secondary structure														T	T			G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T			S						T	T								T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		V	N	V	S	F	S	I	P	K	E	G	A	M	A	F	F	D	V	F	A	M	P	A	D	.	.	A	K	N	K	D	E	A	Y	Q	F	L	N
Query Conservation																										.	.
Alig confidence				.	.	.	.	.	.	.																.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		N	G	.	.	.	.	.	.	.	E	G	L	G	L	T	G	G	F	F	L	S	S	R	R	Y	A	T	A	W	G	P	F	V	Q	Q	V	M	G
Template Known Secondary structure			S	.	.	.	.	.	.	.	T	T	S																	T
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		203	.								.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions