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Job DescriptionP31133
Confidence99.94%DateThu Jan 5 11:47:16 GMT 2012
Rank67Aligned Residues306
% Identity11%Templatec3cg3A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:upf0100 protein ph0151; PDBTitle: crystal structure of p. horikoshii periplasmic binding2 protein moda/wtpa with bound tungstate
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AEQKTLHIYNWSDYIA. . PDTVANFEKET. . . . GIKVVYDVFDSNE. VLEGKLMAGSTGFDLVVP. SASFLERQLTAGVF
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Template Sequence  SREARLIIFHAGSLSIPLSQVEEKFTKYAQEKLGVKVTFQDEASGSVKAVRKVTDLKKRADIVAVADYTLIPQLMIPNYT
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GGG


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   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  QPLDKSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVS
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Template Sequence  DFYVLFATNEIVIAFTNKSKYADEMLKNPDKWYEILSRPDVSFGFSDPNQDPCG. . YRSVMVMKLAELYYGRPIFKELVE
Template Known Secondary structure  S


TTSTT
GGGTT
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   105....110.........120.........130.........140.........150........ .160.........170.........180..
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  FLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEA
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Template Sequence  KTTNIY. SNGTRIYAPKEIIIKDKRVIMRPKETDLVGLVESGSLDYIFIYKSVAKQHHLSYITLPDDINLGDFNKADFYG
Template Known Secondary structure  TTBS
.TT
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BSSTTSSTTTSS
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GGGT
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   183..... .190.........200.........210.........220.........230.........240.........250.........260.
 
   259260.........270.........280.........290.........300.........310.........320 .........330......
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Query Sequence  KNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKA. ATPLVSAEVRENPGIY
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Template Sequence  RVSITLGSTGKTIKAKPIVYGITVLKNAPNRELAIEFLRFLLGNEGRKIFEDN. YQEFLSPPVAFGNVPPEIRRLVEVK
Template Known Secondary structure  T
TTT






TT
TTST.T

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   262.......270.........280.........290.........300.........310.... .....320.........330.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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