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Job DescriptionP31133
Confidence99.95%DateThu Jan 5 11:47:16 GMT 2012
Rank64Aligned Residues276
% Identity11%Templatec3cfxA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:upf0100 protein ma_0280; PDBTitle: crystal structure of m. acetivorans periplasmic binding protein2 moda/wtpa with bound tungstate
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QKTLHIYNWSDYIA. . PDTVANFEKET. GIKVVYDVFDSNEVLEGKLMAGSTGFDLVVP. SASFLERQLTAGVFQPLDKS
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Template Sequence  GEVLTVFHAGSLSVPFEELEAEFEAQHPGVDVQREAAG. SAQSVRKITELGKKADVLASADYALIPSLMVPEYADWYAAF
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Query Sequence  KLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPE
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Template Sequence  ARNQM. . . . . . . . . . ILAYTNESKYGDEINTDNWYEILRRPDVRYGFSNPNDDPAGYRSQMVTQLAESYYNDDMIYDDLM
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Query Sequence  EVFATVLNYLGKD. . . . . . . . . . . . . PNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQA
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Template Sequence  LANTGMTLTTEENGTALIHVPASEEISPNTSKIMLRSMEVELSSALETGEIDYLYIYRSVAEQHGFEYVALPPAIDLSSL
Template Known Secondary structure  GGGSS

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Query Sequence  SNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANA
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Template Sequence  EYADNYSKVQV. EMVNGEVVTGSPIVYGVTIPNNAENSELATEFVALLLGETGQQIFIEN. GQPPI
Template Known Secondary structure  GGTT.
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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