 |
Job Description | P31133 | Confidence | 33.34% | Date | Thu Jan 5 11:47:16 GMT 2012 |
Rank | 100 | Aligned Residues | 47 |
% Identity | 15% | Template | c2h9qC_ |
PDB info |
PDB header:transcription | Chain: C: PDB Molecule:hth-type transcriptional regulator catm; |
PDBTitle: crystal structure of the effector binding domain of a catm2 variant (r156h)
|
Resolution | 2.49 Å |
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
. | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | T | L | H | I | Y | N | W | S | D | Y | I | A | . |
. |
. |
P | D | T | V | A | N | F | E | K | E | T | . |
G | I | K | V | V | Y | D | V | F | D | S | N | E | V | L | E | G | K | L | M | A | G |
Query Conservation |   |
  |   |
|
|   |
|   |   |
|   |   |   |   |   | . | . | . |   |   |   |
|   |   |
|
|   |   |   | . |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
S | Q | T | L | R | I | G | Y | V | S | S | L | L | Y | G | L | L | P | E | I | I | Y | L | F | R | Q | Q | N | P | E | I | H | I | E | L | I | E | C | G | T | K | D | Q | I | N | A | L | K | Q | G | K |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
| G | G | G | G | G | T | T |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|