Return to main results Retrieve Phyre Job Id

Job DescriptionQ46941
Confidence93.90%DateThu Jan 5 12:36:00 GMT 2012
Rank117Aligned Residues66
% Identity12%Templated2hr3a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.... .. ...170.........180.........190...
Predicted Secondary structure 











..

.




Query SS confidence 




































. .

.


























Query Sequence  LDVANEKIRQLFIGRYLSFTGGNTLTQMEFTIMGYMV. . SG. YNPYQIAEVLDMDIRSIYAYKQRIEKR
Query Conservation         
                

 

  

 

 .. 
. 
  


  
 

  

  
   
  
Alig confidence 




































..

.


























Template Conservation 
   
      
 
 
       


  
  

  
    
  
  


  
 
   


  
  

  
Template Sequence  LAAHLRSQVTTLTRRLRREAQADPVQFSQLVVLGAIDRLGGDVTPSELAAAERXRSSNLAALLRELERG
Template Known Secondary structure  TT


TTS
B
TT

T
Template Predicted Secondary structure 













Template SS confidence 




































































   910.........20.........30.........40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions