Return to main results Retrieve Phyre Job Id

Job DescriptionQ46941
Confidence68.22%DateThu Jan 5 12:36:00 GMT 2012
Rank433Aligned Residues43
% Identity28%Templated2gmga1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PF0610-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170........ .180.........190.....
Predicted Secondary structure 






....

Query SS confidence 

























. . . .
















Query Sequence  TQMEFTIMGYMVSGYNPYQIAEVLDM. . . . DIRSIYAYKQRIEKRMG
Query Conservation 
 

  

 

  
 
  


  
 
....
  

  
   
  


Alig confidence 

























....
















Template Conservation 
 

 

 

   
 

 


  
 
     

 

 

 






Template Sequence  TRREKIIELLLEGDYSPSELARILDMRGKGSKKVILEDLKVISKIAK
Template Known Secondary structure  TTTS
B
TTSS


SS

T
Template Predicted Secondary structure 










Template SS confidence 














































   11........20.........30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions