 |
Job Description | Q46941 | Confidence | 75.86% | Date | Thu Jan 5 12:36:00 GMT 2012 |
Rank | 316 | Aligned Residues | 41 |
% Identity | 12% | Template | d2b5aa1 |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| SinR domain-like
|
Resolution | 1.54 |
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | M | V | S | G | Y | N | P | Y | Q | I | A | E | V | L | D | M | D | I | R | S | I | Y | A | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | Q | R | I | E | K | R | M | G | G | K | I | N | E | L | F |
Query Conservation |   |
|
|   |   |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|
|   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
R | T | Q | K | G | V | S | Q | E | E | L | A | D | L | A | G | L | H | R | T | Y | I | S | E | V | E | R | G | D | R | N | I | S | L | I | N | I | H | K | I | C | A | A | L | D | I | P | A | S | T | F | F |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  | T | T |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|