Return to main results Retrieve Phyre Job Id

Job DescriptionQ46941
Confidence62.61%DateThu Jan 5 12:36:00 GMT 2012
Rank490Aligned Residues47
% Identity17%Templated1repc1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Replication initiation protein
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160...... ...170.........180.........190.......
Predicted Secondary structure 




..........







Query SS confidence 















. . . . . . . . . .






























Query Sequence  TLTQMEFTIMGYMVSG. . . . . . . . . . YNPYQIAEVLDMDIRSIYAYKQRIEKRMGGK
Query Conservation   

 

  

 

  
.......... 
  


  
 

  

  
   
  


  
Alig confidence 















..........






























Template Conservation   

  
 


   

 
         
 
 
     

    

  

 
   
  
Template Sequence  SLSRDQKRMLYLFVDQIRKSHDGICEIHVAKYAEIFGLTSAEASKDIRQALKSFAGK
Template Known Secondary structure 


T



TT

TTTT
Template Predicted Secondary structure 















Template SS confidence 
























































   30.........40.........50.........60.........70.........80......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions