Return to main results Retrieve Phyre Job Id

Job DescriptionQ46941
Confidence90.39%DateThu Jan 5 12:36:00 GMT 2012
Rank212Aligned Residues60
% Identity13%Templated1p4xa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.... . ....170.........180.........190...
Predicted Secondary structure 











..
..





Query SS confidence 






























. .
. .



























Query Sequence  KIRQLFIGRYLSFTGGNTLTQMEFTIMGYMV. . S. . GYNPYQIAEVLDMDIRSIYAYKQRIEKR
Query Conservation   
                

 

  

 

 .. ..
 
  


  
 

  

  
   
  
Alig confidence 






























..
..



























Template Conservation          
         

  
  

  
        
  


  
      

  
  

  
Template Sequence  IIEAYMFRFKKKVKPEVDMTIKEFILLTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKH
Template Known Secondary structure  TTT
SS
S
S
SSSS
GGGTT
Template Predicted Secondary structure 















Template SS confidence 































































   14.....20.........30.........40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions