Return to main results Retrieve Phyre Job Id

Job DescriptionQ46941
Confidence90.84%DateThu Jan 5 12:36:00 GMT 2012
Rank202Aligned Residues68
% Identity15%Templated1lj9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150.........160... ......170.........180.........190...
Predicted Secondary structure 













..






Query SS confidence 





































. .





























Query Sequence  DGLDVANEKIRQLFIGRYLSFTGGNTLTQMEFTIMGYM. . VSGYNPYQIAEVLDMDIRSIYAYKQRIEKR
Query Conservation 

       
                

 

  

 

..  
 
  


  
 

  

  
   
  
Alig confidence 





































..





























Template Conservation   

   
              
   


  
   
  
      
  


  
 
   


  
  
   
Template Sequence  TDILREIGMIARALDSISNIEFKELSLTRGQYLYLVRVCENPGIIQEKIAELIKVDRTTAARAIKRLEEQ
Template Known Secondary structure 

TGGGT
TTTSTTT

T
Template Predicted Secondary structure 












Template SS confidence 





































































   2.......10.........20.........30.........40.........50.........60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions