Return to main results Retrieve Phyre Job Id

Job DescriptionQ46941
Confidence65.44%DateThu Jan 5 12:36:00 GMT 2012
Rank461Aligned Residues42
% Identity21%Templated1dpua_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain C-terminal domain of RPA32
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   149150.........160... ......170...... ...180.........190
Predicted Secondary structure 




.....



.


Query SS confidence 














. . . . .












.













Query Sequence  GNTLTQMEFTIMGYM. . . . . VSGYNPYQIAEVL. DMDIRSIYAYKQRI
Query Conservation     

 

  

 

.....  
 
  


  
. 

  

  
   
Alig confidence 














.....












.













Template Conservation   



  
  

  
 
     

 
 

   
       
  


 
Template Sequence  ANGLTVAQNQVLNLIKACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFL
Template Known Secondary structure 


S



TTTSTTS
Template Predicted Secondary structure 
















Template SS confidence 















































   202.......210.........220.........230.........240.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions