Job Description Q46941 Confidence 98.35% Date Thu Jan 5 12:36:00 GMT 2012 Rank 26 Aligned Residues 132 % Identity 12% Template c3r0jA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis Resolution 2.50 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	G	Y	I	F	V	D	F	S	V	S	F	L	R	L	F	L	E	K	D	W	I	D	Y	L	A	S	T	D	M	G	I	V	L	V	S	D	R	N	M	Q	S	L	A	N	Y	W	R	K	H	N	S	A	I	S	A	V	I	Y	N	D	D	G	L	D	V	A	N	E	K	I	R	Q	L	F	I	G	R	Y
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		R	P	D	A	V	I	L	D	V	.	X	P	G	X	D	G	F	G	V	L	R	R	L	R	A	D	G	I	D	A	P	A	L	F	L	T	A	R	D	S	L	Q	D	K	I	A	G	L	T	L	G	G	D	D	Y	V	T	K	P	F	S	L	E	E	V	V	A	R	L	R	V	I	L	R	R	A	G	K	N	V
Template Known Secondary structure				S							.			S	S												T	T											S	T	T									T	S	T	T						S	S
Template Predicted Secondary structure											.
Template SS confidence
		64	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		144	.	.	.	.	.	150	.																	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.											.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.											.	.	.	.	.
Query Sequence		L	S	F	T	G	G	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	Q	M	E	F	T	I	M	G	Y	M	V	S	G	.	.	.	.	Y	N	P	Y	Q	I	A	E	V	L	.	.	.	.	.	D	M	D	I	R	S	I	Y	A	Y	K	Q	R	I	E	K	R	M	G	G
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.											.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		R	L	T	F	A	D	I	E	L	D	E	E	T	H	E	V	W	K	A	G	Q	P	V	S	L	S	P	T	E	F	T	L	L	R	Y	F	V	I	N	A	G	T	V	L	S	K	P	K	I	L	D	H	V	W	R	Y	D	F	G	G	D	V	N	V	V	E	S	Y	V	S	Y	L	R	R	K	I	D	T
Template Known Secondary structure						T	T					T	T	T						T	T																			T	T	T			B										T	T	T	S			S		T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions