Job Description Q46941 Confidence 92.84% Date Thu Jan 5 12:36:00 GMT 2012 Rank 151 Aligned Residues 73 % Identity 10% Template c3f6cB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli Resolution 1.45 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.
Query Sequence		S	G	Y	I	F	V	D	F	S	V	S	F	L	R	L	F	L	E	K	D	W	I	D	Y	L	A	S	T	D	M	G	I	V	L	V	.	.	.	.	.	.	S	D	R	N	M	Q	S	L	A	N	Y	W	R	K	H	N	S	A	I	S	A	V	I	Y	N	D	D	G	L	D	V	A	N	E	K	I	R	Q	L
Query Conservation																																					.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	I	V	I	I	D	V	D	I	P	G	V	N	G	I	Q	V	L	E	T	L	R	K	R	Q	Y	S	G	I	I	I	I	V	S	A	K	D	H	F	Y	G	K	H	C	A	D	A	G	A	N	G	F	V	S	K	K	E	G	.	.	.	.	.	.	.	.	.	.	M	N	N	I	I	A	A	I	E	A	A
Template Known Secondary structure			S						T	T		S	S	S												T	T			S											S	T							T	T		S					G	G	G		.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.											.	.	.	.	.	110	.	.	.	.	.
		139	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	G	R	Y	L	S	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	G	Y	C	Y	F	P	F
Template Known Secondary structure			T	T			B
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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