 |
Job Description | Q46941 | Confidence | 94.28% | Date | Thu Jan 5 12:36:00 GMT 2012 |
Rank | 102 | Aligned Residues | 46 |
% Identity | 20% | Template | c2zxjB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcriptional regulatory protein walr; |
PDBTitle: crystal structure of yycf dna-binding domain from staphylococcus2 aureus
|
Resolution | 1.87 Å |
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
|
|
. | . | . | 170 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | T | Q | M | E | F | T | I | M | G | Y | M | V | S | G | . |
. |
. |
. |
Y | N | P | Y | Q | I | A | E | V | L | . |
. |
. |
. |
. |
D | M | D | I | R | S | I | Y | A | Y | K | Q | R | I | E | K | R | M | G | G |
Query Conservation |   |
  |
|
|   |
|
|   |   |
|
|   |
|
|   |   |
| . | . | . | . |   |
|   |   |
|
|
|   |   |
| . | . | . | . | . |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |   |
Template Sequence |   |
E | L | T | H | R | E | F | E | L | F | H | Y | L | S | K | H | M | G | Q | V | M | T | R | E | H | L | L | Q | T | V | W | G | Y | D | Y | F | G | D | V | R | T | V | D | V | T | I | R | R | L | R | E | K | I | E | D |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T |
| T | T |
|
| S |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|