Return to main results Retrieve Phyre Job Id

Job DescriptionQ46941
Confidence96.34%DateThu Jan 5 12:36:00 GMT 2012
Rank51Aligned Residues43
% Identity14%Templatec1u78A_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   147..150.........160... ......170.........180.........
Predicted Secondary structure 






.






Query SS confidence 
















.

























Query Sequence  TGGNTLTQMEFTIMGYM. VSGYNPYQIAEVLDMDIRSIYAYKQR
Query Conservation       

 

  

 

.  
 
  


  
 

  

  
   
Alig confidence 
















.

























Template Conservation 

   

   
  
  
   
 
   

  

 
  

   

 
Template Sequence  PRGSALSDTERAQLDVMKLLNVSLHEMSRKISRSRHCIRVYLKD
Template Known Secondary structure 

S



TT

T

S
Template Predicted Secondary structure 













Template SS confidence 











































   2.......10.........20.........30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions