Job Description Q46941 Confidence 98.39% Date Thu Jan 5 12:36:00 GMT 2012 Rank 25 Aligned Residues 134 % Identity 15% Template c1p2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure analysis of response regulator drrb, a2 thermotoga maritima ompr/phob homolog Resolution 1.80 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	G	Y	I	F	V	D	F	S	V	S	F	L	R	L	F	L	E	K	D	W	I	D	Y	L	A	S	T	D	M	G	I	V	L	V	S	D	R	N	M	Q	S	L	A	N	Y	W	R	K	H	N	S	A	I	S	A	V	I	Y	N	D	D	G	L	D	V	A	N	E	K	I	R	Q	L	F	I	G	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	H	V	V	V	L	D	V	X	L	P	D	Y	S	G	Y	E	I	C	R	X	I	K	E	T	R	P	E	T	W	V	I	L	L	T	L	L	S	D	D	E	S	V	L	K	G	F	E	A	G	A	D	D	Y	V	T	K	P	F	N	P	E	I	L	L	A	R	V	K	R	F	L	E	R	E	K	K	G	L
Template Known Secondary structure				S						S	B		S	S	S	B													T	T	S							S			S											T		S					S	S																				S
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		144	.	.	.	.	.	150	.																.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.											.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.											.	.	.
Query Sequence		L	S	F	T	G	G	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	Q	M	E	F	T	I	M	G	Y	M	V	S	G	.	.	.	.	Y	N	P	Y	Q	I	A	E	V	L	.	.	.	D	M	D	I	R	S	I	Y	A	Y	K	Q	R	I	E	K	R	M	G	G	K
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.											.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.											.	.	.
Template Conservation
Template Sequence		Y	D	F	G	D	L	K	I	D	A	T	G	F	T	V	F	L	K	G	K	R	I	H	L	P	K	K	E	F	E	I	L	L	F	L	A	E	N	A	G	K	V	V	T	R	E	K	L	L	E	T	F	W	E	D	P	V	S	P	R	V	V	D	T	V	I	K	R	I	R	K	A	I	E	D	D
Template Known Secondary structure					T	T					T	T	T	T					T	T																			T	T	T	S													S	S				T																S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions