Job Description Q46941 Confidence 99.12% Date Thu Jan 5 12:36:00 GMT 2012 Rank 20 Aligned Residues 130 % Identity 14% Template c1kgsA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna binding response regulator d; PDBTitle: crystal structure at 1.50 a of an ompr/phob homolog from thermotoga2 maritima Resolution 1.50 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Y	I	F	V	D	F	S	V	S	F	L	R	L	F	L	E	K	D	W	I	D	Y	L	A	S	T	D	M	G	I	V	L	V	S	D	R	N	M	Q	S	L	A	N	Y	W	R	K	H	N	S	A	I	S	A	V	I	Y	N	D	D	G	L	D	V	A	N	E	K	I	R	Q	L	F	I	G	R	Y	L
Query Conservation
Alig confidence																																																	.	.	.
Template Conservation																																																	.	.	.
Template Sequence		F	D	V	V	I	L	D	I	X	L	P	V	H	D	G	W	E	I	L	K	S	X	R	E	S	G	V	N	T	P	V	L	X	L	T	A	L	S	D	V	E	Y	R	V	K	G	L	.	.	.	N	X	G	A	D	D	Y	L	P	K	P	F	D	L	R	E	L	I	A	R	V	R	A	L	I	R	R	K	S	E
Template Known Secondary structure			S						S			S	S	S												T	T										S	S									T		.	.	.					S					S	S
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		145	.	.	.	.	150	.																						.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		S	F	T	G	G	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	Q	M	E	F	T	I	M	G	Y	M	V	.	.	.	.	S	G	Y	N	P	Y	Q	I	A	E	V	L	D	M	D	I	R	S	I	Y	A	Y	K	Q	R	I	E	K	R	M	G	G	K
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		S	K	S	T	K	L	V	C	G	D	L	I	L	D	T	A	T	K	K	A	Y	R	G	S	K	E	I	D	L	T	K	K	E	Y	Q	I	L	E	Y	L	V	X	N	K	N	R	V	V	T	K	E	E	L	Q	E	H	L	W	V	F	S	D	V	L	R	S	H	I	K	N	L	R	K	K	V	D	K	G
Template Known Secondary structure		S		S	S					T	T					T	T	T	T					T	T																			T	T	T	S																															T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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