Job Description P10905 Confidence 100.00% Date Wed Jan 25 15:20:37 GMT 2012 Rank 1 Aligned Residues 288 % Identity 24% Template c3fh6F_ PDB info PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli Resolution 4.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		P	V	F	R	S	R	W	L	P	Y	L	L	V	A	P	Q	L	I	I	T	V	I	F	F	I	W	P	A	G	E	A	L	W	Y	S	L	Q	S	V	D	P	F	G	F	S	.	.	.	.	.	.	.	S	Q	F	V	G	L	D	N	F	V	T	L	F	H	D	S	Y	Y	L	D	S	F	W	T	T	I	K	F
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	I	L	S	S	A	G	L	Y	I	Y	V	Y	P	G	M	A	G	M	G	L	F	V	L	F	P	L	V	C	T	I	A	I	A	F	T	N	Y	S	S	T	N	Q	L	T	F	E	R	A	Q	E	V	L	L	D	R	S	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	F	L	A	I	F	V	W
Template Known Secondary structure																									T									T	T	S	S	S	S		S	S	S		S	S											T				T	T					S		S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.
Predicted Secondary structure																					.	.	.	.	.																																																.
Query SS confidence																					.	.	.	.	.																																																.
Query Sequence		S	T	F	V	T	V	S	G	L	L	V	S	L	F	F	A	A	L	V	.	.	.	.	.	E	Y	I	V	R	G	S	R	F	Y	Q	T	L	M	L	L	P	Y	A	V	A	P	A	V	A	A	V	L	W	I	F	L	F	N	P	G	R	G	L	I	T	H	F	L	A	E	F	.	G	Y	D	W	N	H	A	Q
Query Conservation																					.	.	.	.	.																																																.
Alig confidence																					.	.	.	.	.																																																.
Template Conservation
Template Sequence		T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G	V	K	P	A	W	F	S
Template Known Secondary structure																									T		S	S	S	S															S		S											S		S	S	S	S										S	S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	G	Q	A	M	F	L	V	V	F	A	S	V	W	K	Q	I	S	Y	N	F	L	F	F	Y	A	A	L	Q	S	I	P	R	S	L	I	E	A	A	A	I	D	G	A	G	P	I	R	R	F	F	K	I	A	L	P	L	I	A	P	V	S	F	F	L	L	V	V	N	L	V	Y	A	F	F	D	T	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L
Template Known Secondary structure		S																															S															S							T	T	T	T	T	T																	T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
		233	.	.	.	.	.	.	240	.								.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.																					.	.	.
Query SS confidence											.	.	.	.	.	.	.																					.	.	.
Query Sequence		V	I	D	A	A	T	S	G	G	.	.	.	.	.	.	.	P	V	Q	A	T	T	T	L	I	Y	K	I	Y	R	E	G	F	T	G	L	.	.	.	D	L	A	S	S	A	A	Q	S	V	V	L	M	F	L	V	I	V	L	T	V	V	Q	F	R	Y	V	E	S	K	V	R
Query Conservation											.	.	.	.	.	.	.																					.	.	.
Alig confidence											.	.	.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V	N	L	K	A	T	R	M	K	F	D
Template Known Secondary structure							S	S		S			S	S		S	S	S			S	S										T	T		S	S	S	S		S	S																										S	S
Template Predicted Secondary structure
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions